Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.75■□□□□ 0.59
Fen1P39749 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Fen1P39749 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fen1P39749 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Fen1P39749 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fen1P39749 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Fen1P39749 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fen1P39749 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.74■□□□□ 0.59
Fen1P39749 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Fen1P39749 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fen1P39749 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fen1P39749 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fen1P39749 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.74■□□□□ 0.59
Fen1P39749 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fen1P39749 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fen1P39749 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fen1P39749 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Fen1P39749 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Fen1P39749 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Fen1P39749 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Fen1P39749 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Fen1P39749 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Fen1P39749 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Fen1P39749 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Fen1P39749 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Fen1P39749 Grk6-206ENSMUST00000224995 2971 ntBASIC18.73■□□□□ 0.59
Fen1P39749 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Fen1P39749 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Fen1P39749 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Fen1P39749 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fen1P39749 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.72■□□□□ 0.59
Fen1P39749 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Fen1P39749 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fen1P39749 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.72■□□□□ 0.59
Fen1P39749 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fen1P39749 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Fen1P39749 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fen1P39749 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fen1P39749 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.72■□□□□ 0.59
Fen1P39749 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fen1P39749 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Fen1P39749 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fen1P39749 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.71■□□□□ 0.59
Fen1P39749 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fen1P39749 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Fen1P39749 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.71■□□□□ 0.59
Fen1P39749 Serp2-204ENSMUST00000228055 705 ntBASIC18.71■□□□□ 0.59
Fen1P39749 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fen1P39749 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fen1P39749 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Fen1P39749 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fen1P39749 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Fen1P39749 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fen1P39749 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fen1P39749 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.71■□□□□ 0.58
Fen1P39749 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fen1P39749 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fen1P39749 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.7■□□□□ 0.58
Fen1P39749 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fen1P39749 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fen1P39749 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fen1P39749 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fen1P39749 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fen1P39749 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fen1P39749 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fen1P39749 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fen1P39749 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fen1P39749 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fen1P39749 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fen1P39749 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Fen1P39749 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Fen1P39749 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fen1P39749 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fen1P39749 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fen1P39749 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Fen1P39749 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.69■□□□□ 0.58
Fen1P39749 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fen1P39749 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Fen1P39749 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fen1P39749 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.69■□□□□ 0.58
Fen1P39749 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Fen1P39749 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Fen1P39749 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fen1P39749 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fen1P39749 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.69■□□□□ 0.58
Fen1P39749 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Fen1P39749 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Fen1P39749 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Fen1P39749 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Fen1P39749 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Fen1P39749 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Fen1P39749 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Fen1P39749 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Fen1P39749 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Fen1P39749 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
Fen1P39749 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.68■□□□□ 0.58
Fen1P39749 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.68■□□□□ 0.58
Fen1P39749 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.68■□□□□ 0.58
Fen1P39749 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
Fen1P39749 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms