Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 BC021767-201ENSMUST00000126387 1716 ntBASIC17.45■□□□□ 0.38
RetP35546 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RetP35546 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RetP35546 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RetP35546 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
RetP35546 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RetP35546 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RetP35546 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.45■□□□□ 0.38
RetP35546 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RetP35546 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RetP35546 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RetP35546 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RetP35546 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RetP35546 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RetP35546 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RetP35546 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RetP35546 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RetP35546 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.44■□□□□ 0.38
RetP35546 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RetP35546 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.44■□□□□ 0.38
RetP35546 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RetP35546 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RetP35546 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.44■□□□□ 0.38
RetP35546 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RetP35546 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RetP35546 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RetP35546 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RetP35546 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RetP35546 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.43■□□□□ 0.38
RetP35546 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RetP35546 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RetP35546 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.43■□□□□ 0.38
RetP35546 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RetP35546 Gm8520-201ENSMUST00000186517 868 ntBASIC17.43■□□□□ 0.38
RetP35546 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.43■□□□□ 0.38
RetP35546 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RetP35546 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RetP35546 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RetP35546 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RetP35546 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RetP35546 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RetP35546 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RetP35546 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RetP35546 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RetP35546 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RetP35546 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RetP35546 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RetP35546 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RetP35546 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RetP35546 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RetP35546 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RetP35546 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RetP35546 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RetP35546 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RetP35546 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RetP35546 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RetP35546 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RetP35546 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RetP35546 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RetP35546 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RetP35546 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RetP35546 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RetP35546 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RetP35546 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RetP35546 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.41■□□□□ 0.38
RetP35546 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RetP35546 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RetP35546 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RetP35546 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RetP35546 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RetP35546 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RetP35546 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RetP35546 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RetP35546 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RetP35546 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RetP35546 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RetP35546 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RetP35546 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RetP35546 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RetP35546 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RetP35546 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RetP35546 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RetP35546 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RetP35546 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.4■□□□□ 0.38
RetP35546 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.4■□□□□ 0.38
RetP35546 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.4■□□□□ 0.38
RetP35546 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RetP35546 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RetP35546 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RetP35546 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RetP35546 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RetP35546 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RetP35546 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RetP35546 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RetP35546 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RetP35546 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RetP35546 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RetP35546 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RetP35546 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.39■□□□□ 0.37
RetP35546 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms