Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Mmp13P33435 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Mmp13P33435 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Mmp13P33435 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Mmp13P33435 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Mmp13P33435 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp13P33435 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp13P33435 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp13P33435 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp13P33435 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp13P33435 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp13P33435 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp13P33435 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp13P33435 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp13P33435 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Mmp13P33435 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp13P33435 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Mmp13P33435 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp13P33435 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp13P33435 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp13P33435 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp13P33435 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp13P33435 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.07■□□□□ 0.64
Mmp13P33435 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.07■□□□□ 0.64
Mmp13P33435 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
Mmp13P33435 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp13P33435 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.06■□□□□ 0.64
Mmp13P33435 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp13P33435 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
Mmp13P33435 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp13P33435 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp13P33435 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp13P33435 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.06■□□□□ 0.64
Mmp13P33435 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Mmp13P33435 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp13P33435 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp13P33435 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.06■□□□□ 0.64
Mmp13P33435 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp13P33435 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Mmp13P33435 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.05■□□□□ 0.64
Mmp13P33435 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.05■□□□□ 0.64
Mmp13P33435 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp13P33435 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp13P33435 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp13P33435 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp13P33435 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp13P33435 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp13P33435 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mmp13P33435 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Mmp13P33435 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Mmp13P33435 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mmp13P33435 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mmp13P33435 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Mmp13P33435 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Mmp13P33435 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Mmp13P33435 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mmp13P33435 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Mmp13P33435 Gm8495-201ENSMUST00000188740 694 ntBASIC19.04■□□□□ 0.64
Mmp13P33435 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Mmp13P33435 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Mmp13P33435 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Mmp13P33435 Gm5874-201ENSMUST00000096101 508 ntBASIC19.04■□□□□ 0.64
Mmp13P33435 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mmp13P33435 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.04■□□□□ 0.64
Mmp13P33435 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mmp13P33435 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mmp13P33435 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp13P33435 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp13P33435 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp13P33435 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp13P33435 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.03■□□□□ 0.64
Mmp13P33435 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp13P33435 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp13P33435 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp13P33435 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp13P33435 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp13P33435 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.03■□□□□ 0.64
Mmp13P33435 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp13P33435 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp13P33435 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp13P33435 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Mmp13P33435 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.03■□□□□ 0.64
Mmp13P33435 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Mmp13P33435 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp13P33435 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp13P33435 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp13P33435 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp13P33435 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp13P33435 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.03■□□□□ 0.64
Mmp13P33435 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Mmp13P33435 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Mmp13P33435 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mmp13P33435 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mmp13P33435 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Mmp13P33435 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mmp13P33435 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mmp13P33435 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Mmp13P33435 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.02■□□□□ 0.64
Mmp13P33435 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mmp13P33435 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms