Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 AA386476-201ENSMUST00000098781 1665 ntBASIC16.03■□□□□ 0.16
Slc6a1P31648 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Slc6a1P31648 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a1P31648 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.03■□□□□ 0.16
Slc6a1P31648 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a1P31648 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.03■□□□□ 0.16
Slc6a1P31648 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a1P31648 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.03■□□□□ 0.16
Slc6a1P31648 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.03■□□□□ 0.16
Slc6a1P31648 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.03■□□□□ 0.16
Slc6a1P31648 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a1P31648 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a1P31648 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a1P31648 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a1P31648 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a1P31648 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Slc6a1P31648 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.02■□□□□ 0.16
Slc6a1P31648 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Slc6a1P31648 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc6a1P31648 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Slc6a1P31648 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc6a1P31648 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a1P31648 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a1P31648 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a1P31648 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a1P31648 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a1P31648 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a1P31648 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a1P31648 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a1P31648 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a1P31648 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Slc6a1P31648 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Slc6a1P31648 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Slc6a1P31648 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.01■□□□□ 0.15
Slc6a1P31648 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a1P31648 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a1P31648 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc6a1P31648 Gm45244-201ENSMUST00000211328 2200 ntBASIC16■□□□□ 0.15
Slc6a1P31648 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a1P31648 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16■□□□□ 0.15
Slc6a1P31648 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a1P31648 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a1P31648 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16■□□□□ 0.15
Slc6a1P31648 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Slc6a1P31648 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a1P31648 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a1P31648 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a1P31648 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16■□□□□ 0.15
Slc6a1P31648 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a1P31648 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16■□□□□ 0.15
Slc6a1P31648 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16■□□□□ 0.15
Slc6a1P31648 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Slc6a1P31648 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a1P31648 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a1P31648 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16■□□□□ 0.15
Slc6a1P31648 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a1P31648 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Slc6a1P31648 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a1P31648 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a1P31648 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Slc6a1P31648 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Slc6a1P31648 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Slc6a1P31648 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a1P31648 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a1P31648 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.99■□□□□ 0.15
Slc6a1P31648 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a1P31648 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Slc6a1P31648 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.99■□□□□ 0.15
Slc6a1P31648 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a1P31648 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.99■□□□□ 0.15
Slc6a1P31648 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Slc6a1P31648 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.99■□□□□ 0.15
Slc6a1P31648 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.99■□□□□ 0.15
Slc6a1P31648 Gm12821-201ENSMUST00000120022 600 ntBASIC15.99■□□□□ 0.15
Slc6a1P31648 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.99■□□□□ 0.15
Slc6a1P31648 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a1P31648 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a1P31648 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Slc6a1P31648 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.99■□□□□ 0.15
Slc6a1P31648 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Slc6a1P31648 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.99■□□□□ 0.15
Slc6a1P31648 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Slc6a1P31648 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Slc6a1P31648 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a1P31648 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a1P31648 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a1P31648 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a1P31648 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a1P31648 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a1P31648 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a1P31648 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a1P31648 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a1P31648 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a1P31648 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a1P31648 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.98■□□□□ 0.15
Slc6a1P31648 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.98■□□□□ 0.15
Slc6a1P31648 Golgb1-201ENSMUST00000023534 498 ntBASIC15.98■□□□□ 0.15
Slc6a1P31648 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a1P31648 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc6a1P31648 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms