Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxd8P23463 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxd8P23463 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.41■□□□□ 0.7
Hoxd8P23463 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxd8P23463 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.41■□□□□ 0.7
Hoxd8P23463 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.41■□□□□ 0.7
Hoxd8P23463 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.41■□□□□ 0.7
Hoxd8P23463 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxd8P23463 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.41■□□□□ 0.7
Hoxd8P23463 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxd8P23463 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxd8P23463 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxd8P23463 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxd8P23463 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxd8P23463 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxd8P23463 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxd8P23463 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxd8P23463 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxd8P23463 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxd8P23463 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxd8P23463 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxd8P23463 Mir6982-201ENSMUST00000184354 68 ntBASIC19.4■□□□□ 0.7
Hoxd8P23463 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxd8P23463 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxd8P23463 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.39■□□□□ 0.69
Hoxd8P23463 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxd8P23463 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxd8P23463 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxd8P23463 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxd8P23463 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Hoxd8P23463 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Hoxd8P23463 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Hoxd8P23463 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxd8P23463 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxd8P23463 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Hoxd8P23463 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.38■□□□□ 0.69
Hoxd8P23463 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.38■□□□□ 0.69
Hoxd8P23463 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxd8P23463 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxd8P23463 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxd8P23463 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxd8P23463 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Hoxd8P23463 Mir1199-201ENSMUST00000117015 119 ntBASIC19.37■□□□□ 0.69
Hoxd8P23463 Gm715-201ENSMUST00000117865 831 ntBASIC19.37■□□□□ 0.69
Hoxd8P23463 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Hoxd8P23463 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.37■□□□□ 0.69
Hoxd8P23463 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.37■□□□□ 0.69
Hoxd8P23463 Zfp783-201ENSMUST00000095946 670 ntBASIC19.37■□□□□ 0.69
Hoxd8P23463 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxd8P23463 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxd8P23463 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxd8P23463 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxd8P23463 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxd8P23463 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Hoxd8P23463 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.36■□□□□ 0.69
Hoxd8P23463 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxd8P23463 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxd8P23463 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxd8P23463 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxd8P23463 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.36■□□□□ 0.69
Hoxd8P23463 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.36■□□□□ 0.69
Hoxd8P23463 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxd8P23463 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxd8P23463 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxd8P23463 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxd8P23463 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Hoxd8P23463 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxd8P23463 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxd8P23463 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Hoxd8P23463 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxd8P23463 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxd8P23463 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxd8P23463 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Hoxd8P23463 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxd8P23463 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxd8P23463 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.34■□□□□ 0.69
Hoxd8P23463 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxd8P23463 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxd8P23463 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxd8P23463 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.34■□□□□ 0.69
Hoxd8P23463 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Hoxd8P23463 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxd8P23463 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxd8P23463 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Hoxd8P23463 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hoxd8P23463 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Hoxd8P23463 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hoxd8P23463 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxd8P23463 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.33■□□□□ 0.68
Hoxd8P23463 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxd8P23463 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxd8P23463 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.33■□□□□ 0.68
Hoxd8P23463 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxd8P23463 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxd8P23463 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxd8P23463 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxd8P23463 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxd8P23463 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxd8P23463 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxd8P23463 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms