Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6bP23440 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6bP23440 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.28■□□□□ 0.84
Pde6bP23440 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6bP23440 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6bP23440 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6bP23440 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6bP23440 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6bP23440 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6bP23440 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6bP23440 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.28■□□□□ 0.84
Pde6bP23440 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6bP23440 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Pde6bP23440 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6bP23440 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pde6bP23440 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pde6bP23440 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pde6bP23440 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.27■□□□□ 0.84
Pde6bP23440 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pde6bP23440 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pde6bP23440 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pde6bP23440 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pde6bP23440 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.27■□□□□ 0.84
Pde6bP23440 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.27■□□□□ 0.84
Pde6bP23440 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pde6bP23440 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pde6bP23440 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pde6bP23440 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pde6bP23440 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pde6bP23440 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pde6bP23440 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pde6bP23440 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pde6bP23440 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Pde6bP23440 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pde6bP23440 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pde6bP23440 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pde6bP23440 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.26■□□□□ 0.83
Pde6bP23440 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pde6bP23440 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pde6bP23440 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pde6bP23440 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pde6bP23440 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pde6bP23440 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pde6bP23440 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pde6bP23440 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pde6bP23440 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pde6bP23440 Gm12896-201ENSMUST00000118430 226 ntBASIC20.25■□□□□ 0.83
Pde6bP23440 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Pde6bP23440 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.25■□□□□ 0.83
Pde6bP23440 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pde6bP23440 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pde6bP23440 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pde6bP23440 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pde6bP23440 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pde6bP23440 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pde6bP23440 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pde6bP23440 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pde6bP23440 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.24■□□□□ 0.83
Pde6bP23440 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pde6bP23440 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pde6bP23440 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Pde6bP23440 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pde6bP23440 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pde6bP23440 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pde6bP23440 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pde6bP23440 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pde6bP23440 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pde6bP23440 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pde6bP23440 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pde6bP23440 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Pde6bP23440 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Pde6bP23440 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pde6bP23440 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pde6bP23440 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pde6bP23440 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pde6bP23440 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Pde6bP23440 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.23■□□□□ 0.83
Pde6bP23440 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pde6bP23440 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pde6bP23440 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.23■□□□□ 0.83
Pde6bP23440 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pde6bP23440 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pde6bP23440 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Pde6bP23440 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pde6bP23440 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Pde6bP23440 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pde6bP23440 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pde6bP23440 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pde6bP23440 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pde6bP23440 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.22■□□□□ 0.83
Pde6bP23440 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.22■□□□□ 0.83
Pde6bP23440 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pde6bP23440 Gm27275-201ENSMUST00000184318 272 ntBASIC20.22■□□□□ 0.83
Pde6bP23440 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.22■□□□□ 0.83
Pde6bP23440 Gm2559-201ENSMUST00000201323 363 ntBASIC20.22■□□□□ 0.83
Pde6bP23440 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.22■□□□□ 0.83
Pde6bP23440 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.22■□□□□ 0.83
Pde6bP23440 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pde6bP23440 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pde6bP23440 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms