Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccl3P10855 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccl3P10855 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ccl3P10855 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccl3P10855 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccl3P10855 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccl3P10855 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccl3P10855 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.57■□□□□ 0.24
Ccl3P10855 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.57■□□□□ 0.24
Ccl3P10855 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.57■□□□□ 0.24
Ccl3P10855 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.57■□□□□ 0.24
Ccl3P10855 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ccl3P10855 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccl3P10855 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccl3P10855 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccl3P10855 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccl3P10855 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccl3P10855 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccl3P10855 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccl3P10855 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Ccl3P10855 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccl3P10855 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccl3P10855 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccl3P10855 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccl3P10855 Flg-201ENSMUST00000050758 1488 ntBASIC16.56■□□□□ 0.24
Ccl3P10855 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccl3P10855 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Ccl3P10855 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.56■□□□□ 0.24
Ccl3P10855 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ccl3P10855 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ccl3P10855 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccl3P10855 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccl3P10855 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccl3P10855 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ccl3P10855 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccl3P10855 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccl3P10855 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ccl3P10855 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.55■□□□□ 0.24
Ccl3P10855 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ccl3P10855 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.55■□□□□ 0.24
Ccl3P10855 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccl3P10855 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccl3P10855 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ccl3P10855 Gm11927-201ENSMUST00000118472 759 ntBASIC16.55■□□□□ 0.24
Ccl3P10855 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ccl3P10855 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccl3P10855 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ccl3P10855 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.55■□□□□ 0.24
Ccl3P10855 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccl3P10855 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccl3P10855 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccl3P10855 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccl3P10855 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Ccl3P10855 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ccl3P10855 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccl3P10855 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.55■□□□□ 0.24
Ccl3P10855 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccl3P10855 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ccl3P10855 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ccl3P10855 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ccl3P10855 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ccl3P10855 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccl3P10855 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Ccl3P10855 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Ccl3P10855 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ccl3P10855 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.54■□□□□ 0.24
Ccl3P10855 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ccl3P10855 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ccl3P10855 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccl3P10855 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.54■□□□□ 0.24
Ccl3P10855 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccl3P10855 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.54■□□□□ 0.24
Ccl3P10855 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.54■□□□□ 0.24
Ccl3P10855 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccl3P10855 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccl3P10855 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl3P10855 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl3P10855 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl3P10855 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ccl3P10855 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Ccl3P10855 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl3P10855 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl3P10855 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl3P10855 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl3P10855 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl3P10855 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.53■□□□□ 0.24
Ccl3P10855 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.53■□□□□ 0.24
Ccl3P10855 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl3P10855 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl3P10855 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl3P10855 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl3P10855 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccl3P10855 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccl3P10855 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccl3P10855 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccl3P10855 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccl3P10855 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccl3P10855 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccl3P10855 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccl3P10855 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms