Protein–RNA interactions for Protein: P04945

Ig kappa chain V-VI region NQ2-6.1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04945 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
P04945 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P04945 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.04■□□□□ 0.16
P04945 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04945 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
P04945 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.04■□□□□ 0.16
P04945 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04945 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.04■□□□□ 0.16
P04945 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
P04945 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04945 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04945 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.04■□□□□ 0.16
P04945 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04945 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04945 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
P04945 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04945 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.04■□□□□ 0.16
P04945 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.04■□□□□ 0.16
P04945 Gm9988-201ENSMUST00000069786 435 ntBASIC16.04■□□□□ 0.16
P04945 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
P04945 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04945 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.04■□□□□ 0.16
P04945 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04945 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
P04945 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.03■□□□□ 0.16
P04945 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
P04945 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
P04945 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
P04945 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
P04945 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
P04945 Gm13234-201ENSMUST00000120010 747 ntBASIC16.03■□□□□ 0.16
P04945 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
P04945 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
P04945 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.03■□□□□ 0.16
P04945 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
P04945 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
P04945 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.02■□□□□ 0.16
P04945 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
P04945 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
P04945 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.02■□□□□ 0.16
P04945 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
P04945 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
P04945 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
P04945 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
P04945 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
P04945 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.02■□□□□ 0.16
P04945 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
P04945 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
P04945 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.02■□□□□ 0.16
P04945 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.02■□□□□ 0.16
P04945 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
P04945 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
P04945 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
P04945 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
P04945 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
P04945 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
P04945 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
P04945 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04945 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
P04945 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
P04945 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04945 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.01■□□□□ 0.15
P04945 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
P04945 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04945 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.01■□□□□ 0.15
P04945 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.01■□□□□ 0.15
P04945 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04945 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
P04945 Gm10493-201ENSMUST00000097270 612 ntBASIC16.01■□□□□ 0.15
P04945 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04945 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
P04945 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
P04945 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
P04945 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16■□□□□ 0.15
P04945 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
P04945 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
P04945 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16■□□□□ 0.15
P04945 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16■□□□□ 0.15
P04945 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16■□□□□ 0.15
P04945 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
P04945 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
P04945 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
P04945 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
P04945 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
P04945 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
P04945 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
P04945 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
P04945 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
P04945 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
P04945 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
P04945 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
P04945 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
P04945 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
P04945 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
P04945 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
P04945 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
P04945 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
P04945 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
P04945 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
P04945 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms