Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
P04213 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
P04213 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
P04213 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
P04213 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
P04213 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
P04213 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
P04213 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
P04213 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
P04213 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.95■□□□□ 0.46
P04213 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
P04213 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
P04213 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
P04213 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
P04213 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
P04213 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
P04213 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
P04213 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.94■□□□□ 0.46
P04213 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
P04213 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.94■□□□□ 0.46
P04213 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.94■□□□□ 0.46
P04213 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.94■□□□□ 0.46
P04213 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
P04213 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.94■□□□□ 0.46
P04213 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
P04213 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
P04213 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
P04213 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
P04213 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.94■□□□□ 0.46
P04213 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
P04213 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
P04213 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
P04213 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
P04213 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
P04213 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.93■□□□□ 0.46
P04213 Reep4-203ENSMUST00000226563 1444 ntBASIC17.93■□□□□ 0.46
P04213 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
P04213 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
P04213 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
P04213 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
P04213 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
P04213 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
P04213 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.93■□□□□ 0.46
P04213 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
P04213 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
P04213 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
P04213 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
P04213 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
P04213 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.92■□□□□ 0.46
P04213 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
P04213 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
P04213 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.92■□□□□ 0.46
P04213 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.92■□□□□ 0.46
P04213 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
P04213 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
P04213 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
P04213 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.92■□□□□ 0.46
P04213 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.92■□□□□ 0.46
P04213 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.92■□□□□ 0.46
P04213 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
P04213 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
P04213 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
P04213 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
P04213 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
P04213 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04213 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04213 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04213 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04213 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04213 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.91■□□□□ 0.46
P04213 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04213 Gm9988-201ENSMUST00000069786 435 ntBASIC17.91■□□□□ 0.46
P04213 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.91■□□□□ 0.46
P04213 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04213 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
P04213 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
P04213 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04213 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04213 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04213 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04213 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04213 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04213 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04213 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04213 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04213 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04213 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04213 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.9■□□□□ 0.46
P04213 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04213 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
P04213 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04213 Grk6-206ENSMUST00000224995 2971 ntBASIC17.9■□□□□ 0.46
P04213 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
P04213 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
P04213 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
P04213 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
P04213 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
P04213 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
P04213 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
P04213 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms