Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igh-VJ558P01758 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.2■□□□□ 0.18
Igh-VJ558P01758 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igh-VJ558P01758 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igh-VJ558P01758 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igh-VJ558P01758 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Igh-VJ558P01758 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Igh-VJ558P01758 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igh-VJ558P01758 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.2■□□□□ 0.18
Igh-VJ558P01758 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.2■□□□□ 0.18
Igh-VJ558P01758 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Igh-VJ558P01758 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igh-VJ558P01758 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Igh-VJ558P01758 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igh-VJ558P01758 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Igh-VJ558P01758 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Igh-VJ558P01758 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igh-VJ558P01758 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igh-VJ558P01758 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igh-VJ558P01758 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Igh-VJ558P01758 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Igh-VJ558P01758 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.19■□□□□ 0.18
Igh-VJ558P01758 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igh-VJ558P01758 Gm10493-201ENSMUST00000097270 612 ntBASIC16.19■□□□□ 0.18
Igh-VJ558P01758 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igh-VJ558P01758 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.19■□□□□ 0.18
Igh-VJ558P01758 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Igh-VJ558P01758 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.19■□□□□ 0.18
Igh-VJ558P01758 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igh-VJ558P01758 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igh-VJ558P01758 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igh-VJ558P01758 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Igh-VJ558P01758 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igh-VJ558P01758 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Igh-VJ558P01758 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igh-VJ558P01758 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Igh-VJ558P01758 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.18■□□□□ 0.18
Igh-VJ558P01758 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igh-VJ558P01758 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Igh-VJ558P01758 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Igh-VJ558P01758 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Igh-VJ558P01758 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igh-VJ558P01758 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igh-VJ558P01758 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igh-VJ558P01758 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igh-VJ558P01758 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.18■□□□□ 0.18
Igh-VJ558P01758 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igh-VJ558P01758 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igh-VJ558P01758 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igh-VJ558P01758 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igh-VJ558P01758 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Igh-VJ558P01758 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Igh-VJ558P01758 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igh-VJ558P01758 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igh-VJ558P01758 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igh-VJ558P01758 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.17■□□□□ 0.18
Igh-VJ558P01758 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.17■□□□□ 0.18
Igh-VJ558P01758 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Igh-VJ558P01758 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Igh-VJ558P01758 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igh-VJ558P01758 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igh-VJ558P01758 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igh-VJ558P01758 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Igh-VJ558P01758 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Igh-VJ558P01758 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igh-VJ558P01758 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igh-VJ558P01758 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Igh-VJ558P01758 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igh-VJ558P01758 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Igh-VJ558P01758 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Igh-VJ558P01758 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igh-VJ558P01758 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Igh-VJ558P01758 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Igh-VJ558P01758 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Igh-VJ558P01758 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igh-VJ558P01758 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igh-VJ558P01758 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igh-VJ558P01758 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Igh-VJ558P01758 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Igh-VJ558P01758 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Igh-VJ558P01758 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igh-VJ558P01758 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igh-VJ558P01758 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Igh-VJ558P01758 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igh-VJ558P01758 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Igh-VJ558P01758 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.14■□□□□ 0.17
Igh-VJ558P01758 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igh-VJ558P01758 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igh-VJ558P01758 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Igh-VJ558P01758 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igh-VJ558P01758 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.14■□□□□ 0.17
Igh-VJ558P01758 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.14■□□□□ 0.17
Igh-VJ558P01758 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.14■□□□□ 0.17
Igh-VJ558P01758 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.14■□□□□ 0.17
Igh-VJ558P01758 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.14■□□□□ 0.17
Igh-VJ558P01758 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.14■□□□□ 0.17
Igh-VJ558P01758 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igh-VJ558P01758 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Igh-VJ558P01758 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.14■□□□□ 0.17
Igh-VJ558P01758 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms