Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Best1O88870 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Best1O88870 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.02■□□□□ 0.48
Best1O88870 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Best1O88870 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Best1O88870 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Best1O88870 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Best1O88870 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Best1O88870 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Best1O88870 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Best1O88870 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.01■□□□□ 0.47
Best1O88870 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Best1O88870 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Best1O88870 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Best1O88870 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Best1O88870 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Best1O88870 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18■□□□□ 0.47
Best1O88870 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Best1O88870 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Best1O88870 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Best1O88870 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18■□□□□ 0.47
Best1O88870 Gm37856-201ENSMUST00000191634 999 ntBASIC18■□□□□ 0.47
Best1O88870 Gm2559-201ENSMUST00000201323 363 ntBASIC18■□□□□ 0.47
Best1O88870 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Best1O88870 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Best1O88870 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Best1O88870 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Best1O88870 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Best1O88870 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Best1O88870 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Best1O88870 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Best1O88870 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.99■□□□□ 0.47
Best1O88870 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Best1O88870 Gm22325-201ENSMUST00000158904 308 ntBASIC17.99■□□□□ 0.47
Best1O88870 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Best1O88870 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Best1O88870 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.99■□□□□ 0.47
Best1O88870 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.99■□□□□ 0.47
Best1O88870 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Best1O88870 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.99■□□□□ 0.47
Best1O88870 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Best1O88870 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Best1O88870 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.98■□□□□ 0.47
Best1O88870 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Best1O88870 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Best1O88870 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Best1O88870 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Best1O88870 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Best1O88870 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Best1O88870 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Best1O88870 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Best1O88870 Dio3-201ENSMUST00000097228 1449 ntBASIC17.98■□□□□ 0.47
Best1O88870 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.97■□□□□ 0.47
Best1O88870 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Best1O88870 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Best1O88870 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.97■□□□□ 0.47
Best1O88870 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Best1O88870 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Best1O88870 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Best1O88870 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Best1O88870 Gm8520-201ENSMUST00000186517 868 ntBASIC17.97■□□□□ 0.47
Best1O88870 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Best1O88870 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Best1O88870 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Best1O88870 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Best1O88870 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Best1O88870 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Best1O88870 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Best1O88870 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Best1O88870 Gm12896-201ENSMUST00000118430 226 ntBASIC17.96■□□□□ 0.47
Best1O88870 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Best1O88870 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Best1O88870 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.96■□□□□ 0.47
Best1O88870 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Best1O88870 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Best1O88870 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Best1O88870 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.96■□□□□ 0.47
Best1O88870 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Best1O88870 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Best1O88870 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.96■□□□□ 0.47
Best1O88870 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Best1O88870 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Best1O88870 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Best1O88870 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Best1O88870 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Best1O88870 Trmt13-210ENSMUST00000198454 880 ntBASIC17.95■□□□□ 0.46
Best1O88870 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Best1O88870 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Best1O88870 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Best1O88870 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Best1O88870 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.95■□□□□ 0.46
Best1O88870 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Best1O88870 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Best1O88870 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Best1O88870 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.94■□□□□ 0.46
Best1O88870 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.94■□□□□ 0.46
Best1O88870 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Best1O88870 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Best1O88870 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Best1O88870 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms