Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Hcn1O88704 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hcn1O88704 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hcn1O88704 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.81■□□□□ 0.44
Hcn1O88704 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hcn1O88704 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hcn1O88704 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hcn1O88704 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hcn1O88704 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Hcn1O88704 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.81■□□□□ 0.44
Hcn1O88704 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Hcn1O88704 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hcn1O88704 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hcn1O88704 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Hcn1O88704 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hcn1O88704 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hcn1O88704 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Hcn1O88704 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Hcn1O88704 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.8■□□□□ 0.44
Hcn1O88704 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hcn1O88704 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Hcn1O88704 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hcn1O88704 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hcn1O88704 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hcn1O88704 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hcn1O88704 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hcn1O88704 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hcn1O88704 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.79■□□□□ 0.44
Hcn1O88704 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hcn1O88704 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hcn1O88704 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hcn1O88704 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hcn1O88704 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.79■□□□□ 0.44
Hcn1O88704 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Hcn1O88704 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hcn1O88704 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hcn1O88704 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hcn1O88704 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hcn1O88704 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Hcn1O88704 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hcn1O88704 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hcn1O88704 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.78■□□□□ 0.44
Hcn1O88704 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Hcn1O88704 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hcn1O88704 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Hcn1O88704 Gm42642-201ENSMUST00000200683 355 ntBASIC17.78■□□□□ 0.44
Hcn1O88704 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hcn1O88704 Gm9988-201ENSMUST00000069786 435 ntBASIC17.78■□□□□ 0.44
Hcn1O88704 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Hcn1O88704 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hcn1O88704 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hcn1O88704 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hcn1O88704 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hcn1O88704 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hcn1O88704 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hcn1O88704 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Hcn1O88704 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hcn1O88704 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hcn1O88704 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.77■□□□□ 0.44
Hcn1O88704 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hcn1O88704 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Hcn1O88704 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hcn1O88704 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hcn1O88704 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hcn1O88704 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hcn1O88704 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Hcn1O88704 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.77■□□□□ 0.44
Hcn1O88704 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.77■□□□□ 0.44
Hcn1O88704 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hcn1O88704 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Hcn1O88704 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hcn1O88704 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.77■□□□□ 0.44
Hcn1O88704 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Hcn1O88704 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hcn1O88704 BC021767-201ENSMUST00000126387 1716 ntBASIC17.77■□□□□ 0.44
Hcn1O88704 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hcn1O88704 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.77■□□□□ 0.43
Hcn1O88704 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.77■□□□□ 0.43
Hcn1O88704 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.43
Hcn1O88704 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hcn1O88704 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hcn1O88704 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.77■□□□□ 0.43
Hcn1O88704 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hcn1O88704 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hcn1O88704 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hcn1O88704 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hcn1O88704 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hcn1O88704 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hcn1O88704 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hcn1O88704 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hcn1O88704 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.76■□□□□ 0.43
Hcn1O88704 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.76■□□□□ 0.43
Hcn1O88704 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hcn1O88704 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hcn1O88704 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hcn1O88704 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hcn1O88704 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Hcn1O88704 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hcn1O88704 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hcn1O88704 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms