Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ClppO88696 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ClppO88696 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
ClppO88696 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ClppO88696 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ClppO88696 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
ClppO88696 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ClppO88696 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ClppO88696 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ClppO88696 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ClppO88696 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClppO88696 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClppO88696 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClppO88696 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ClppO88696 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClppO88696 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClppO88696 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClppO88696 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
ClppO88696 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.13■□□□□ 0.49
ClppO88696 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.13■□□□□ 0.49
ClppO88696 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.13■□□□□ 0.49
ClppO88696 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ClppO88696 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClppO88696 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ClppO88696 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClppO88696 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ClppO88696 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClppO88696 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClppO88696 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ClppO88696 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ClppO88696 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ClppO88696 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ClppO88696 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.12■□□□□ 0.49
ClppO88696 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ClppO88696 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ClppO88696 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.12■□□□□ 0.49
ClppO88696 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ClppO88696 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ClppO88696 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ClppO88696 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ClppO88696 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ClppO88696 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
ClppO88696 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ClppO88696 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ClppO88696 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ClppO88696 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ClppO88696 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ClppO88696 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClppO88696 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClppO88696 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClppO88696 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClppO88696 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClppO88696 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.1■□□□□ 0.49
ClppO88696 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.1■□□□□ 0.49
ClppO88696 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClppO88696 Gm4968-201ENSMUST00000071458 858 ntBASIC18.1■□□□□ 0.49
ClppO88696 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClppO88696 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClppO88696 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClppO88696 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClppO88696 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClppO88696 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClppO88696 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClppO88696 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ClppO88696 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
ClppO88696 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ClppO88696 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ClppO88696 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ClppO88696 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
ClppO88696 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClppO88696 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.09■□□□□ 0.49
ClppO88696 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClppO88696 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClppO88696 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ClppO88696 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ClppO88696 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ClppO88696 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ClppO88696 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ClppO88696 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.08■□□□□ 0.48
ClppO88696 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ClppO88696 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClppO88696 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClppO88696 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClppO88696 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClppO88696 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClppO88696 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClppO88696 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClppO88696 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ClppO88696 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.07■□□□□ 0.48
ClppO88696 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.07■□□□□ 0.48
ClppO88696 Gm6365-201ENSMUST00000054711 744 ntBASIC18.07■□□□□ 0.48
ClppO88696 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClppO88696 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClppO88696 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClppO88696 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ClppO88696 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.07■□□□□ 0.48
ClppO88696 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClppO88696 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClppO88696 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.06■□□□□ 0.48
ClppO88696 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms