Protein–RNA interactions for Protein: O55106

Strn, Striatin, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrnO55106 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
StrnO55106 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
StrnO55106 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
StrnO55106 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
StrnO55106 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
StrnO55106 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
StrnO55106 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
StrnO55106 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.57■□□□□ 0.88
StrnO55106 Gm15378-201ENSMUST00000121894 207 ntBASIC20.57■□□□□ 0.88
StrnO55106 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
StrnO55106 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
StrnO55106 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
StrnO55106 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
StrnO55106 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
StrnO55106 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
StrnO55106 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
StrnO55106 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
StrnO55106 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
StrnO55106 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
StrnO55106 Gm2399-201ENSMUST00000104944 225 ntBASIC20.56■□□□□ 0.88
StrnO55106 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
StrnO55106 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
StrnO55106 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
StrnO55106 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
StrnO55106 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
StrnO55106 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
StrnO55106 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
StrnO55106 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
StrnO55106 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
StrnO55106 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
StrnO55106 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
StrnO55106 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
StrnO55106 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
StrnO55106 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
StrnO55106 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
StrnO55106 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.55■□□□□ 0.88
StrnO55106 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.55■□□□□ 0.88
StrnO55106 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.55■□□□□ 0.88
StrnO55106 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
StrnO55106 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
StrnO55106 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
StrnO55106 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
StrnO55106 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
StrnO55106 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
StrnO55106 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
StrnO55106 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
StrnO55106 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.54■□□□□ 0.88
StrnO55106 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
StrnO55106 Gm7977-201ENSMUST00000193787 748 ntBASIC20.54■□□□□ 0.88
StrnO55106 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
StrnO55106 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
StrnO55106 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
StrnO55106 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
StrnO55106 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
StrnO55106 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
StrnO55106 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
StrnO55106 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
StrnO55106 Gm715-201ENSMUST00000117865 831 ntBASIC20.53■□□□□ 0.88
StrnO55106 Gm13158-201ENSMUST00000122007 736 ntBASIC20.53■□□□□ 0.88
StrnO55106 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
StrnO55106 Gm10698-201ENSMUST00000182663 604 ntBASIC20.53■□□□□ 0.88
StrnO55106 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.53■□□□□ 0.88
StrnO55106 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
StrnO55106 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
StrnO55106 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
StrnO55106 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.53■□□□□ 0.88
StrnO55106 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
StrnO55106 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
StrnO55106 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
StrnO55106 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
StrnO55106 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
StrnO55106 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
StrnO55106 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
StrnO55106 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.52■□□□□ 0.88
StrnO55106 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.52■□□□□ 0.88
StrnO55106 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
StrnO55106 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.52■□□□□ 0.88
StrnO55106 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
StrnO55106 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
StrnO55106 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.52■□□□□ 0.88
StrnO55106 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
StrnO55106 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
StrnO55106 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
StrnO55106 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.51■□□□□ 0.87
StrnO55106 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
StrnO55106 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
StrnO55106 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.51■□□□□ 0.87
StrnO55106 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
StrnO55106 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.51■□□□□ 0.87
StrnO55106 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
StrnO55106 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.5■□□□□ 0.87
StrnO55106 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
StrnO55106 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
StrnO55106 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.5■□□□□ 0.87
StrnO55106 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.5■□□□□ 0.87
StrnO55106 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
StrnO55106 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
StrnO55106 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
StrnO55106 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
StrnO55106 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms