Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trdmt1O55055 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trdmt1O55055 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trdmt1O55055 Flg-201ENSMUST00000050758 1488 ntBASIC20.69■□□□□ 0.9
Trdmt1O55055 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trdmt1O55055 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.68■□□□□ 0.9
Trdmt1O55055 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trdmt1O55055 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.68■□□□□ 0.9
Trdmt1O55055 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.68■□□□□ 0.9
Trdmt1O55055 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.68■□□□□ 0.9
Trdmt1O55055 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Trdmt1O55055 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trdmt1O55055 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trdmt1O55055 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trdmt1O55055 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trdmt1O55055 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trdmt1O55055 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trdmt1O55055 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trdmt1O55055 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trdmt1O55055 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.67■□□□□ 0.9
Trdmt1O55055 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trdmt1O55055 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trdmt1O55055 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.67■□□□□ 0.9
Trdmt1O55055 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trdmt1O55055 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trdmt1O55055 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trdmt1O55055 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trdmt1O55055 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trdmt1O55055 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trdmt1O55055 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Trdmt1O55055 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.66■□□□□ 0.9
Trdmt1O55055 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.66■□□□□ 0.9
Trdmt1O55055 Gm37055-201ENSMUST00000191866 133 ntBASIC20.66■□□□□ 0.9
Trdmt1O55055 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trdmt1O55055 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trdmt1O55055 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trdmt1O55055 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trdmt1O55055 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Trdmt1O55055 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Trdmt1O55055 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trdmt1O55055 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Trdmt1O55055 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trdmt1O55055 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trdmt1O55055 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Trdmt1O55055 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.65■□□□□ 0.9
Trdmt1O55055 Gm15565-201ENSMUST00000118890 427 ntBASIC20.65■□□□□ 0.9
Trdmt1O55055 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trdmt1O55055 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.65■□□□□ 0.9
Trdmt1O55055 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trdmt1O55055 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.65■□□□□ 0.9
Trdmt1O55055 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trdmt1O55055 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Trdmt1O55055 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
Trdmt1O55055 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trdmt1O55055 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trdmt1O55055 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trdmt1O55055 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.64■□□□□ 0.9
Trdmt1O55055 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trdmt1O55055 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.64■□□□□ 0.9
Trdmt1O55055 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Trdmt1O55055 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trdmt1O55055 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trdmt1O55055 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trdmt1O55055 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trdmt1O55055 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trdmt1O55055 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trdmt1O55055 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trdmt1O55055 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.63■□□□□ 0.89
Trdmt1O55055 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trdmt1O55055 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trdmt1O55055 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Trdmt1O55055 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trdmt1O55055 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trdmt1O55055 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trdmt1O55055 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Trdmt1O55055 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Trdmt1O55055 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trdmt1O55055 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trdmt1O55055 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trdmt1O55055 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Trdmt1O55055 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Trdmt1O55055 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trdmt1O55055 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trdmt1O55055 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Trdmt1O55055 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.62■□□□□ 0.89
Trdmt1O55055 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trdmt1O55055 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trdmt1O55055 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trdmt1O55055 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trdmt1O55055 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trdmt1O55055 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trdmt1O55055 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trdmt1O55055 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trdmt1O55055 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.61■□□□□ 0.89
Trdmt1O55055 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trdmt1O55055 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trdmt1O55055 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trdmt1O55055 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.61■□□□□ 0.89
Trdmt1O55055 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.61■□□□□ 0.89
Trdmt1O55055 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms