Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Limk2O54785 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Limk2O54785 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Limk2O54785 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.96■□□□□ 0.63
Limk2O54785 Gm10653-202ENSMUST00000139570 835 ntBASIC18.96■□□□□ 0.63
Limk2O54785 Gm4968-201ENSMUST00000071458 858 ntBASIC18.96■□□□□ 0.63
Limk2O54785 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.96■□□□□ 0.63
Limk2O54785 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Limk2O54785 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Limk2O54785 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.96■□□□□ 0.63
Limk2O54785 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Limk2O54785 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.95■□□□□ 0.62
Limk2O54785 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Limk2O54785 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Limk2O54785 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Limk2O54785 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Limk2O54785 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Limk2O54785 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Limk2O54785 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.95■□□□□ 0.62
Limk2O54785 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.95■□□□□ 0.62
Limk2O54785 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Limk2O54785 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Limk2O54785 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Limk2O54785 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Limk2O54785 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Limk2O54785 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Limk2O54785 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.95■□□□□ 0.62
Limk2O54785 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Limk2O54785 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Limk2O54785 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Limk2O54785 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Limk2O54785 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Limk2O54785 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Limk2O54785 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Limk2O54785 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Limk2O54785 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.94■□□□□ 0.62
Limk2O54785 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Limk2O54785 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Limk2O54785 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Limk2O54785 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.94■□□□□ 0.62
Limk2O54785 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Limk2O54785 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Limk2O54785 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Limk2O54785 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Limk2O54785 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.93■□□□□ 0.62
Limk2O54785 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Limk2O54785 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Limk2O54785 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Limk2O54785 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.93■□□□□ 0.62
Limk2O54785 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Limk2O54785 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Limk2O54785 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Limk2O54785 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Limk2O54785 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Limk2O54785 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Limk2O54785 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Limk2O54785 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Limk2O54785 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Limk2O54785 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Limk2O54785 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Limk2O54785 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Limk2O54785 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Limk2O54785 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Limk2O54785 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Limk2O54785 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Limk2O54785 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Limk2O54785 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Limk2O54785 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Limk2O54785 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.92■□□□□ 0.62
Limk2O54785 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Limk2O54785 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Limk2O54785 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Limk2O54785 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Limk2O54785 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Limk2O54785 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Limk2O54785 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Limk2O54785 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Limk2O54785 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Limk2O54785 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Limk2O54785 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Limk2O54785 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Limk2O54785 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Limk2O54785 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Limk2O54785 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Limk2O54785 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Limk2O54785 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Limk2O54785 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Limk2O54785 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.91■□□□□ 0.62
Limk2O54785 Gm20760-201ENSMUST00000179197 648 ntBASIC18.91■□□□□ 0.62
Limk2O54785 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Limk2O54785 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.91■□□□□ 0.62
Limk2O54785 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.91■□□□□ 0.62
Limk2O54785 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Limk2O54785 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Limk2O54785 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Limk2O54785 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.91■□□□□ 0.62
Limk2O54785 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Limk2O54785 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Limk2O54785 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.9■□□□□ 0.62
Limk2O54785 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms