Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.64■□□□□ 0.25
Lsm2O35900 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm2O35900 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.64■□□□□ 0.25
Lsm2O35900 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm2O35900 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lsm2O35900 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.63■□□□□ 0.25
Lsm2O35900 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm2O35900 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.63■□□□□ 0.25
Lsm2O35900 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm2O35900 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.63■□□□□ 0.25
Lsm2O35900 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.63■□□□□ 0.25
Lsm2O35900 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm2O35900 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Lsm2O35900 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm2O35900 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.63■□□□□ 0.25
Lsm2O35900 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm2O35900 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm2O35900 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lsm2O35900 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Lsm2O35900 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.63■□□□□ 0.25
Lsm2O35900 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.62■□□□□ 0.25
Lsm2O35900 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm2O35900 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm2O35900 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm2O35900 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Lsm2O35900 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm2O35900 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm2O35900 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Lsm2O35900 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm2O35900 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm2O35900 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm2O35900 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Lsm2O35900 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm2O35900 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm2O35900 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm2O35900 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm2O35900 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.62■□□□□ 0.25
Lsm2O35900 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm2O35900 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm2O35900 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm2O35900 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm2O35900 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.62■□□□□ 0.25
Lsm2O35900 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm2O35900 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lsm2O35900 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm2O35900 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm2O35900 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm2O35900 Gm22238-201ENSMUST00000175222 88 ntBASIC16.61■□□□□ 0.25
Lsm2O35900 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm2O35900 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm2O35900 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm2O35900 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.61■□□□□ 0.25
Lsm2O35900 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Lsm2O35900 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm2O35900 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lsm2O35900 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm2O35900 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm2O35900 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.6■□□□□ 0.25
Lsm2O35900 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm2O35900 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm2O35900 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Lsm2O35900 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm2O35900 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm2O35900 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm2O35900 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm2O35900 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm2O35900 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.6■□□□□ 0.25
Lsm2O35900 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.6■□□□□ 0.25
Lsm2O35900 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm2O35900 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm2O35900 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Lsm2O35900 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm2O35900 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Lsm2O35900 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm2O35900 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Lsm2O35900 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm2O35900 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.59■□□□□ 0.25
Lsm2O35900 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm2O35900 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Lsm2O35900 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Lsm2O35900 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm2O35900 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
Lsm2O35900 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.59■□□□□ 0.25
Lsm2O35900 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm2O35900 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.59■□□□□ 0.25
Lsm2O35900 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
Lsm2O35900 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm2O35900 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm2O35900 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Lsm2O35900 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Lsm2O35900 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.59■□□□□ 0.25
Lsm2O35900 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.58■□□□□ 0.25
Lsm2O35900 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
Lsm2O35900 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Lsm2O35900 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lsm2O35900 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Lsm2O35900 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lsm2O35900 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.58■□□□□ 0.24
Lsm2O35900 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.58■□□□□ 0.24
Lsm2O35900 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms