Protein–RNA interactions for Protein: O35655

Ppef1, Serine/threonine-protein phosphatase with EF-hands 1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppef1O35655 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC22.18■■□□□ 1.14
Ppef1O35655 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC22.18■■□□□ 1.14
Ppef1O35655 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ppef1O35655 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.18■■□□□ 1.14
Ppef1O35655 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ppef1O35655 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC22.17■■□□□ 1.14
Ppef1O35655 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ppef1O35655 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ppef1O35655 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC22.17■■□□□ 1.14
Ppef1O35655 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC22.17■■□□□ 1.14
Ppef1O35655 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
Ppef1O35655 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Ppef1O35655 Gm34391-201ENSMUST00000203706 907 ntBASIC22.17■■□□□ 1.14
Ppef1O35655 Gm18206-201ENSMUST00000207027 926 ntBASIC22.17■■□□□ 1.14
Ppef1O35655 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC22.17■■□□□ 1.14
Ppef1O35655 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Ppef1O35655 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ppef1O35655 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ppef1O35655 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC22.16■■□□□ 1.14
Ppef1O35655 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ppef1O35655 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ppef1O35655 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ppef1O35655 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ppef1O35655 Mir8098-201ENSMUST00000184011 137 ntBASIC22.15■■□□□ 1.14
Ppef1O35655 Gm17808-201ENSMUST00000200859 894 ntBASIC22.15■■□□□ 1.14
Ppef1O35655 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC22.15■■□□□ 1.14
Ppef1O35655 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ppef1O35655 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ppef1O35655 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Ppef1O35655 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Ppef1O35655 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ppef1O35655 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ppef1O35655 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Ppef1O35655 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ppef1O35655 AC160393.1-201ENSMUST00000218378 1279 ntBASIC22.14■■□□□ 1.13
Ppef1O35655 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ppef1O35655 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ppef1O35655 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC22.14■■□□□ 1.13
Ppef1O35655 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ppef1O35655 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.13■■□□□ 1.13
Ppef1O35655 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC22.13■■□□□ 1.13
Ppef1O35655 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ppef1O35655 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Ppef1O35655 Birc2-201ENSMUST00000054878 378 ntBASIC22.13■■□□□ 1.13
Ppef1O35655 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ppef1O35655 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ppef1O35655 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC22.13■■□□□ 1.13
Ppef1O35655 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ppef1O35655 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ppef1O35655 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ppef1O35655 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ppef1O35655 Gm13884-201ENSMUST00000118103 829 ntBASIC22.12■■□□□ 1.13
Ppef1O35655 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC22.12■■□□□ 1.13
Ppef1O35655 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC22.12■■□□□ 1.13
Ppef1O35655 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ppef1O35655 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ppef1O35655 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ppef1O35655 Gm43909-201ENSMUST00000203443 1876 ntBASIC22.11■■□□□ 1.13
Ppef1O35655 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ppef1O35655 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ppef1O35655 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Ppef1O35655 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ppef1O35655 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC22.11■■□□□ 1.13
Ppef1O35655 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ppef1O35655 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ppef1O35655 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC22.11■■□□□ 1.13
Ppef1O35655 Gm38285-201ENSMUST00000192928 922 ntBASIC22.11■■□□□ 1.13
Ppef1O35655 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC22.11■■□□□ 1.13
Ppef1O35655 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ppef1O35655 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ppef1O35655 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ppef1O35655 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ppef1O35655 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
Ppef1O35655 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC22.1■■□□□ 1.13
Ppef1O35655 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ppef1O35655 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC22.1■■□□□ 1.13
Ppef1O35655 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC22.1■■□□□ 1.13
Ppef1O35655 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ppef1O35655 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Ppef1O35655 Zfp783-201ENSMUST00000095946 670 ntBASIC22.1■■□□□ 1.13
Ppef1O35655 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ppef1O35655 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.1■■□□□ 1.13
Ppef1O35655 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC22.09■■□□□ 1.13
Ppef1O35655 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ppef1O35655 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ppef1O35655 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Ppef1O35655 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC22.09■■□□□ 1.13
Ppef1O35655 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC22.09■■□□□ 1.13
Ppef1O35655 Otx2os1-206ENSMUST00000228153 787 ntBASIC22.09■■□□□ 1.13
Ppef1O35655 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC22.09■■□□□ 1.13
Ppef1O35655 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ppef1O35655 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ppef1O35655 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ppef1O35655 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ppef1O35655 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ppef1O35655 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC22.08■■□□□ 1.13
Ppef1O35655 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ppef1O35655 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ppef1O35655 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Ppef1O35655 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms