Protein–RNA interactions for Protein: J3QNG1

Gm6408, Predicted gene 6408, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6408J3QNG1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gm6408J3QNG1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.64■□□□□ 0.57
Gm6408J3QNG1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm6408J3QNG1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm6408J3QNG1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Gm6408J3QNG1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gm6408J3QNG1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Gm6408J3QNG1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Gm6408J3QNG1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm6408J3QNG1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm6408J3QNG1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm6408J3QNG1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Gm6408J3QNG1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm6408J3QNG1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm6408J3QNG1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm6408J3QNG1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm6408J3QNG1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm6408J3QNG1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm6408J3QNG1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gm6408J3QNG1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm6408J3QNG1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.62■□□□□ 0.57
Gm6408J3QNG1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.62■□□□□ 0.57
Gm6408J3QNG1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.62■□□□□ 0.57
Gm6408J3QNG1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.62■□□□□ 0.57
Gm6408J3QNG1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm6408J3QNG1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gm6408J3QNG1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm6408J3QNG1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.62■□□□□ 0.57
Gm6408J3QNG1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm6408J3QNG1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm6408J3QNG1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm6408J3QNG1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm6408J3QNG1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm6408J3QNG1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm6408J3QNG1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm6408J3QNG1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm6408J3QNG1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm6408J3QNG1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.61■□□□□ 0.57
Gm6408J3QNG1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.61■□□□□ 0.57
Gm6408J3QNG1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm6408J3QNG1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm6408J3QNG1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Gm6408J3QNG1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm6408J3QNG1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm6408J3QNG1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm6408J3QNG1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm6408J3QNG1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Gm6408J3QNG1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm6408J3QNG1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm6408J3QNG1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
Gm6408J3QNG1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm6408J3QNG1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Gm6408J3QNG1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm6408J3QNG1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm6408J3QNG1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Gm6408J3QNG1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Gm6408J3QNG1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm6408J3QNG1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm6408J3QNG1 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.6■□□□□ 0.57
Gm6408J3QNG1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm6408J3QNG1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.6■□□□□ 0.57
Gm6408J3QNG1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm6408J3QNG1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Gm6408J3QNG1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm6408J3QNG1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm6408J3QNG1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm6408J3QNG1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm6408J3QNG1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm6408J3QNG1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm6408J3QNG1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm6408J3QNG1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm6408J3QNG1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm6408J3QNG1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm6408J3QNG1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.59■□□□□ 0.57
Gm6408J3QNG1 Gm38205-201ENSMUST00000192243 258 ntBASIC18.59■□□□□ 0.57
Gm6408J3QNG1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.59■□□□□ 0.57
Gm6408J3QNG1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm6408J3QNG1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm6408J3QNG1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm6408J3QNG1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm6408J3QNG1 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.58■□□□□ 0.57
Gm6408J3QNG1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Gm6408J3QNG1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.58■□□□□ 0.57
Gm6408J3QNG1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm6408J3QNG1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm6408J3QNG1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Gm6408J3QNG1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm6408J3QNG1 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.58■□□□□ 0.56
Gm6408J3QNG1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm6408J3QNG1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Gm6408J3QNG1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Gm6408J3QNG1 Gm43060-201ENSMUST00000200621 289 ntBASIC18.58■□□□□ 0.56
Gm6408J3QNG1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.58■□□□□ 0.56
Gm6408J3QNG1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm6408J3QNG1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm6408J3QNG1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm6408J3QNG1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm6408J3QNG1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm6408J3QNG1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm6408J3QNG1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms