Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn20G5E8X0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn20G5E8X0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Cldn20G5E8X0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.22■□□□□ 0.19
Cldn20G5E8X0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn20G5E8X0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn20G5E8X0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Cldn20G5E8X0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn20G5E8X0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn20G5E8X0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn20G5E8X0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn20G5E8X0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn20G5E8X0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn20G5E8X0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.21■□□□□ 0.19
Cldn20G5E8X0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn20G5E8X0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn20G5E8X0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Cldn20G5E8X0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn20G5E8X0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cldn20G5E8X0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cldn20G5E8X0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
Cldn20G5E8X0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Cldn20G5E8X0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cldn20G5E8X0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cldn20G5E8X0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn20G5E8X0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn20G5E8X0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn20G5E8X0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn20G5E8X0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn20G5E8X0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn20G5E8X0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cldn20G5E8X0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn20G5E8X0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.2■□□□□ 0.18
Cldn20G5E8X0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn20G5E8X0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.2■□□□□ 0.18
Cldn20G5E8X0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cldn20G5E8X0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn20G5E8X0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn20G5E8X0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn20G5E8X0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cldn20G5E8X0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.19■□□□□ 0.18
Cldn20G5E8X0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn20G5E8X0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn20G5E8X0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn20G5E8X0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn20G5E8X0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn20G5E8X0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.19■□□□□ 0.18
Cldn20G5E8X0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.19■□□□□ 0.18
Cldn20G5E8X0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn20G5E8X0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.19■□□□□ 0.18
Cldn20G5E8X0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.19■□□□□ 0.18
Cldn20G5E8X0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.19■□□□□ 0.18
Cldn20G5E8X0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn20G5E8X0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn20G5E8X0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn20G5E8X0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn20G5E8X0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn20G5E8X0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn20G5E8X0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn20G5E8X0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn20G5E8X0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn20G5E8X0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn20G5E8X0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn20G5E8X0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn20G5E8X0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn20G5E8X0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn20G5E8X0 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.18■□□□□ 0.18
Cldn20G5E8X0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn20G5E8X0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn20G5E8X0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn20G5E8X0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldn20G5E8X0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cldn20G5E8X0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldn20G5E8X0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cldn20G5E8X0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.17■□□□□ 0.18
Cldn20G5E8X0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cldn20G5E8X0 Gm43137-201ENSMUST00000198052 594 ntBASIC16.17■□□□□ 0.18
Cldn20G5E8X0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldn20G5E8X0 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.17■□□□□ 0.18
Cldn20G5E8X0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cldn20G5E8X0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldn20G5E8X0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldn20G5E8X0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldn20G5E8X0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cldn20G5E8X0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cldn20G5E8X0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cldn20G5E8X0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.16■□□□□ 0.18
Cldn20G5E8X0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cldn20G5E8X0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
Cldn20G5E8X0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cldn20G5E8X0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cldn20G5E8X0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cldn20G5E8X0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cldn20G5E8X0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cldn20G5E8X0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cldn20G5E8X0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cldn20G5E8X0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cldn20G5E8X0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cldn20G5E8X0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldn20G5E8X0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms