Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.14■□□□□ 0.65
Pcdh9F8VPK8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh9F8VPK8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh9F8VPK8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Pcdh9F8VPK8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdh9F8VPK8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh9F8VPK8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Pcdh9F8VPK8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh9F8VPK8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh9F8VPK8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh9F8VPK8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh9F8VPK8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh9F8VPK8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh9F8VPK8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh9F8VPK8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Pcdh9F8VPK8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh9F8VPK8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh9F8VPK8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh9F8VPK8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh9F8VPK8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Pcdh9F8VPK8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh9F8VPK8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh9F8VPK8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Pcdh9F8VPK8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh9F8VPK8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh9F8VPK8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh9F8VPK8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh9F8VPK8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.12■□□□□ 0.65
Pcdh9F8VPK8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh9F8VPK8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh9F8VPK8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh9F8VPK8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh9F8VPK8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh9F8VPK8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh9F8VPK8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh9F8VPK8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Pcdh9F8VPK8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.12■□□□□ 0.65
Pcdh9F8VPK8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh9F8VPK8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh9F8VPK8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh9F8VPK8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pcdh9F8VPK8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh9F8VPK8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh9F8VPK8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh9F8VPK8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh9F8VPK8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh9F8VPK8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.11■□□□□ 0.65
Pcdh9F8VPK8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh9F8VPK8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.11■□□□□ 0.65
Pcdh9F8VPK8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh9F8VPK8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh9F8VPK8 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.11■□□□□ 0.65
Pcdh9F8VPK8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh9F8VPK8 Gm40848-201ENSMUST00000221998 324 ntBASIC19.11■□□□□ 0.65
Pcdh9F8VPK8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh9F8VPK8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh9F8VPK8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh9F8VPK8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh9F8VPK8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh9F8VPK8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Pcdh9F8VPK8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Pcdh9F8VPK8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh9F8VPK8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh9F8VPK8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.1■□□□□ 0.65
Pcdh9F8VPK8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh9F8VPK8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.1■□□□□ 0.65
Pcdh9F8VPK8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.1■□□□□ 0.65
Pcdh9F8VPK8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdh9F8VPK8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdh9F8VPK8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh9F8VPK8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Pcdh9F8VPK8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh9F8VPK8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh9F8VPK8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdh9F8VPK8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh9F8VPK8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh9F8VPK8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.09■□□□□ 0.65
Pcdh9F8VPK8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh9F8VPK8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Pcdh9F8VPK8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.09■□□□□ 0.65
Pcdh9F8VPK8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh9F8VPK8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh9F8VPK8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh9F8VPK8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh9F8VPK8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh9F8VPK8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh9F8VPK8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Pcdh9F8VPK8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh9F8VPK8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh9F8VPK8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh9F8VPK8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh9F8VPK8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh9F8VPK8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh9F8VPK8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh9F8VPK8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh9F8VPK8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh9F8VPK8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Pcdh9F8VPK8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh9F8VPK8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.08■□□□□ 0.64
Pcdh9F8VPK8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms