Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc188F6WEU2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc188F6WEU2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ccdc188F6WEU2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.03■□□□□ 0.64
Ccdc188F6WEU2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc188F6WEU2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Ccdc188F6WEU2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc188F6WEU2 Gm15375-201ENSMUST00000119510 849 ntBASIC19.03■□□□□ 0.64
Ccdc188F6WEU2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Ccdc188F6WEU2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc188F6WEU2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc188F6WEU2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.03■□□□□ 0.64
Ccdc188F6WEU2 Gm10138-203ENSMUST00000206952 366 ntBASIC19.03■□□□□ 0.64
Ccdc188F6WEU2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc188F6WEU2 Gm18669-201ENSMUST00000216049 778 ntBASIC19.03■□□□□ 0.64
Ccdc188F6WEU2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc188F6WEU2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc188F6WEU2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc188F6WEU2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ccdc188F6WEU2 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.03■□□□□ 0.64
Ccdc188F6WEU2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc188F6WEU2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc188F6WEU2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc188F6WEU2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc188F6WEU2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc188F6WEU2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc188F6WEU2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.02■□□□□ 0.64
Ccdc188F6WEU2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc188F6WEU2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc188F6WEU2 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.02■□□□□ 0.64
Ccdc188F6WEU2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ccdc188F6WEU2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc188F6WEU2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc188F6WEU2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Ccdc188F6WEU2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc188F6WEU2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc188F6WEU2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc188F6WEU2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc188F6WEU2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc188F6WEU2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc188F6WEU2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc188F6WEU2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc188F6WEU2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc188F6WEU2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc188F6WEU2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.01■□□□□ 0.63
Ccdc188F6WEU2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19■□□□□ 0.63
Ccdc188F6WEU2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Ccdc188F6WEU2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19■□□□□ 0.63
Ccdc188F6WEU2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19■□□□□ 0.63
Ccdc188F6WEU2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc188F6WEU2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19■□□□□ 0.63
Ccdc188F6WEU2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc188F6WEU2 Il17rd-202ENSMUST00000223942 2186 ntBASIC19■□□□□ 0.63
Ccdc188F6WEU2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc188F6WEU2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc188F6WEU2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.99■□□□□ 0.63
Ccdc188F6WEU2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.99■□□□□ 0.63
Ccdc188F6WEU2 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.99■□□□□ 0.63
Ccdc188F6WEU2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Ccdc188F6WEU2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ccdc188F6WEU2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc188F6WEU2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc188F6WEU2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc188F6WEU2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc188F6WEU2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc188F6WEU2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc188F6WEU2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc188F6WEU2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc188F6WEU2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc188F6WEU2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.98■□□□□ 0.63
Ccdc188F6WEU2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.98■□□□□ 0.63
Ccdc188F6WEU2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.98■□□□□ 0.63
Ccdc188F6WEU2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ccdc188F6WEU2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.98■□□□□ 0.63
Ccdc188F6WEU2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc188F6WEU2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc188F6WEU2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc188F6WEU2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc188F6WEU2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.97■□□□□ 0.63
Ccdc188F6WEU2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.97■□□□□ 0.63
Ccdc188F6WEU2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.97■□□□□ 0.63
Ccdc188F6WEU2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ccdc188F6WEU2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc188F6WEU2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc188F6WEU2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc188F6WEU2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Ccdc188F6WEU2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.96■□□□□ 0.63
Ccdc188F6WEU2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc188F6WEU2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc188F6WEU2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.96■□□□□ 0.63
Ccdc188F6WEU2 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.96■□□□□ 0.63
Ccdc188F6WEU2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc188F6WEU2 Zfp783-201ENSMUST00000095946 670 ntBASIC18.96■□□□□ 0.63
Ccdc188F6WEU2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.96■□□□□ 0.63
Ccdc188F6WEU2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc188F6WEU2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc188F6WEU2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc188F6WEU2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ccdc188F6WEU2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.95■□□□□ 0.62
Ccdc188F6WEU2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms