Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh17E9PXF0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh17E9PXF0 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.32■□□□□ 0.36
Pcdh17E9PXF0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh17E9PXF0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pcdh17E9PXF0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh17E9PXF0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh17E9PXF0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.32■□□□□ 0.36
Pcdh17E9PXF0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh17E9PXF0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh17E9PXF0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh17E9PXF0 Rab3c-203ENSMUST00000224180 967 ntBASIC17.32■□□□□ 0.36
Pcdh17E9PXF0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh17E9PXF0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh17E9PXF0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh17E9PXF0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.31■□□□□ 0.36
Pcdh17E9PXF0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh17E9PXF0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh17E9PXF0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.31■□□□□ 0.36
Pcdh17E9PXF0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh17E9PXF0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdh17E9PXF0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdh17E9PXF0 Gm22240-201ENSMUST00000175225 82 ntBASIC17.31■□□□□ 0.36
Pcdh17E9PXF0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.31■□□□□ 0.36
Pcdh17E9PXF0 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.31■□□□□ 0.36
Pcdh17E9PXF0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh17E9PXF0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh17E9PXF0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh17E9PXF0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh17E9PXF0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh17E9PXF0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh17E9PXF0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh17E9PXF0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh17E9PXF0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh17E9PXF0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh17E9PXF0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh17E9PXF0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh17E9PXF0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh17E9PXF0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh17E9PXF0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Pcdh17E9PXF0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.3■□□□□ 0.36
Pcdh17E9PXF0 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.3■□□□□ 0.36
Pcdh17E9PXF0 Gm8520-201ENSMUST00000186517 868 ntBASIC17.3■□□□□ 0.36
Pcdh17E9PXF0 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.3■□□□□ 0.36
Pcdh17E9PXF0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh17E9PXF0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh17E9PXF0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh17E9PXF0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh17E9PXF0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Pcdh17E9PXF0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdh17E9PXF0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh17E9PXF0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh17E9PXF0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh17E9PXF0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh17E9PXF0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdh17E9PXF0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh17E9PXF0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh17E9PXF0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.29■□□□□ 0.36
Pcdh17E9PXF0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdh17E9PXF0 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.29■□□□□ 0.36
Pcdh17E9PXF0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh17E9PXF0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh17E9PXF0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh17E9PXF0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh17E9PXF0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh17E9PXF0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh17E9PXF0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh17E9PXF0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pcdh17E9PXF0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh17E9PXF0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.28■□□□□ 0.36
Pcdh17E9PXF0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh17E9PXF0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.28■□□□□ 0.36
Pcdh17E9PXF0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh17E9PXF0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.28■□□□□ 0.36
Pcdh17E9PXF0 Gm37856-201ENSMUST00000191634 999 ntBASIC17.28■□□□□ 0.36
Pcdh17E9PXF0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh17E9PXF0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Pcdh17E9PXF0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Pcdh17E9PXF0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh17E9PXF0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh17E9PXF0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh17E9PXF0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh17E9PXF0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh17E9PXF0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh17E9PXF0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh17E9PXF0 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.27■□□□□ 0.36
Pcdh17E9PXF0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh17E9PXF0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pcdh17E9PXF0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.27■□□□□ 0.36
Pcdh17E9PXF0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh17E9PXF0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh17E9PXF0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh17E9PXF0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh17E9PXF0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh17E9PXF0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.26■□□□□ 0.35
Pcdh17E9PXF0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh17E9PXF0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh17E9PXF0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdh17E9PXF0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh17E9PXF0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms