Protein–RNA interactions for Protein: E9PV98

Trim5, Tripartite motif-containing 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim5E9PV98 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim5E9PV98 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Trim5E9PV98 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim5E9PV98 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Trim5E9PV98 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim5E9PV98 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim5E9PV98 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim5E9PV98 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.02■□□□□ 0.96
Trim5E9PV98 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.02■□□□□ 0.96
Trim5E9PV98 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.02■□□□□ 0.96
Trim5E9PV98 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.02■□□□□ 0.96
Trim5E9PV98 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim5E9PV98 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim5E9PV98 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim5E9PV98 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim5E9PV98 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim5E9PV98 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.01■□□□□ 0.95
Trim5E9PV98 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.01■□□□□ 0.95
Trim5E9PV98 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim5E9PV98 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim5E9PV98 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim5E9PV98 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Trim5E9PV98 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim5E9PV98 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Trim5E9PV98 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim5E9PV98 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21■□□□□ 0.95
Trim5E9PV98 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim5E9PV98 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim5E9PV98 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim5E9PV98 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.99■□□□□ 0.95
Trim5E9PV98 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim5E9PV98 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim5E9PV98 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.99■□□□□ 0.95
Trim5E9PV98 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.99■□□□□ 0.95
Trim5E9PV98 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim5E9PV98 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim5E9PV98 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim5E9PV98 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim5E9PV98 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim5E9PV98 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim5E9PV98 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim5E9PV98 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim5E9PV98 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Trim5E9PV98 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim5E9PV98 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim5E9PV98 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim5E9PV98 Gm6433-201ENSMUST00000118634 875 ntBASIC20.98■□□□□ 0.95
Trim5E9PV98 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim5E9PV98 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Trim5E9PV98 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim5E9PV98 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim5E9PV98 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.98■□□□□ 0.95
Trim5E9PV98 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim5E9PV98 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim5E9PV98 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim5E9PV98 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Trim5E9PV98 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim5E9PV98 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim5E9PV98 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.97■□□□□ 0.95
Trim5E9PV98 Gm11927-201ENSMUST00000118472 759 ntBASIC20.97■□□□□ 0.95
Trim5E9PV98 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.97■□□□□ 0.95
Trim5E9PV98 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Trim5E9PV98 Gm10231-201ENSMUST00000181584 441 ntBASIC20.97■□□□□ 0.95
Trim5E9PV98 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim5E9PV98 Gm10175-202ENSMUST00000208752 441 ntBASIC20.97■□□□□ 0.95
Trim5E9PV98 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.97■□□□□ 0.95
Trim5E9PV98 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim5E9PV98 Gm5417-201ENSMUST00000079706 384 ntBASIC20.97■□□□□ 0.95
Trim5E9PV98 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim5E9PV98 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim5E9PV98 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim5E9PV98 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim5E9PV98 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim5E9PV98 Flg-201ENSMUST00000050758 1488 ntBASIC20.96■□□□□ 0.95
Trim5E9PV98 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim5E9PV98 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim5E9PV98 Gm43799-201ENSMUST00000201845 579 ntBASIC20.96■□□□□ 0.95
Trim5E9PV98 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.96■□□□□ 0.95
Trim5E9PV98 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Trim5E9PV98 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
Trim5E9PV98 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Trim5E9PV98 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim5E9PV98 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim5E9PV98 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim5E9PV98 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim5E9PV98 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim5E9PV98 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim5E9PV98 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim5E9PV98 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim5E9PV98 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim5E9PV98 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Trim5E9PV98 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim5E9PV98 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim5E9PV98 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim5E9PV98 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim5E9PV98 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim5E9PV98 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim5E9PV98 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim5E9PV98 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim5E9PV98 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 98.4 ms