Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Gm28043E0CXC2 Serp2-204ENSMUST00000228055 705 ntBASIC18.68■□□□□ 0.58
Gm28043E0CXC2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28043E0CXC2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28043E0CXC2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28043E0CXC2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28043E0CXC2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.68■□□□□ 0.58
Gm28043E0CXC2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm28043E0CXC2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Gm28043E0CXC2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gm28043E0CXC2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm28043E0CXC2 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.67■□□□□ 0.58
Gm28043E0CXC2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Gm28043E0CXC2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Gm28043E0CXC2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Gm28043E0CXC2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gm28043E0CXC2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Gm28043E0CXC2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm28043E0CXC2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Gm28043E0CXC2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Gm28043E0CXC2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm28043E0CXC2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28043E0CXC2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28043E0CXC2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
Gm28043E0CXC2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28043E0CXC2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28043E0CXC2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28043E0CXC2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28043E0CXC2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm28043E0CXC2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm28043E0CXC2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Gm28043E0CXC2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Gm28043E0CXC2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm28043E0CXC2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm28043E0CXC2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm28043E0CXC2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.65■□□□□ 0.58
Gm28043E0CXC2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm28043E0CXC2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm28043E0CXC2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm28043E0CXC2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm28043E0CXC2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm28043E0CXC2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Gm28043E0CXC2 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.64■□□□□ 0.58
Gm28043E0CXC2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm28043E0CXC2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm28043E0CXC2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm28043E0CXC2 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.64■□□□□ 0.57
Gm28043E0CXC2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm28043E0CXC2 Gm43017-201ENSMUST00000198296 752 ntBASIC18.64■□□□□ 0.57
Gm28043E0CXC2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gm28043E0CXC2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.64■□□□□ 0.57
Gm28043E0CXC2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm28043E0CXC2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm28043E0CXC2 Grk6-206ENSMUST00000224995 2971 ntBASIC18.64■□□□□ 0.57
Gm28043E0CXC2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Gm28043E0CXC2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm28043E0CXC2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm28043E0CXC2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm28043E0CXC2 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.64■□□□□ 0.57
Gm28043E0CXC2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Gm28043E0CXC2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28043E0CXC2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28043E0CXC2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28043E0CXC2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28043E0CXC2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28043E0CXC2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.63■□□□□ 0.57
Gm28043E0CXC2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28043E0CXC2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28043E0CXC2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Gm28043E0CXC2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28043E0CXC2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Gm28043E0CXC2 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.63■□□□□ 0.57
Gm28043E0CXC2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28043E0CXC2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28043E0CXC2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Gm28043E0CXC2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28043E0CXC2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28043E0CXC2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28043E0CXC2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28043E0CXC2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Gm28043E0CXC2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Gm28043E0CXC2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm28043E0CXC2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Gm28043E0CXC2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm28043E0CXC2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm28043E0CXC2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Gm28043E0CXC2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm28043E0CXC2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm28043E0CXC2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm28043E0CXC2 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.62■□□□□ 0.57
Gm28043E0CXC2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm28043E0CXC2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.61■□□□□ 0.57
Gm28043E0CXC2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm28043E0CXC2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm28043E0CXC2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm28043E0CXC2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm28043E0CXC2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.61■□□□□ 0.57
Gm28043E0CXC2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.61■□□□□ 0.57
Gm28043E0CXC2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.61■□□□□ 0.57
Gm28043E0CXC2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms