Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Gm3543D3Z235 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3543D3Z235 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
Gm3543D3Z235 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3543D3Z235 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3543D3Z235 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3543D3Z235 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3543D3Z235 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.83■□□□□ 0.28
Gm3543D3Z235 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.83■□□□□ 0.28
Gm3543D3Z235 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3543D3Z235 Gm38205-201ENSMUST00000192243 258 ntBASIC16.83■□□□□ 0.28
Gm3543D3Z235 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.83■□□□□ 0.28
Gm3543D3Z235 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3543D3Z235 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3543D3Z235 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3543D3Z235 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3543D3Z235 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Gm3543D3Z235 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3543D3Z235 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3543D3Z235 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Gm3543D3Z235 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3543D3Z235 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3543D3Z235 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3543D3Z235 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3543D3Z235 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3543D3Z235 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Gm3543D3Z235 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Gm3543D3Z235 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.82■□□□□ 0.28
Gm3543D3Z235 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3543D3Z235 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3543D3Z235 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.82■□□□□ 0.28
Gm3543D3Z235 Gm13146-201ENSMUST00000118508 780 ntBASIC16.82■□□□□ 0.28
Gm3543D3Z235 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Gm3543D3Z235 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3543D3Z235 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Gm3543D3Z235 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3543D3Z235 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3543D3Z235 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3543D3Z235 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3543D3Z235 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Gm3543D3Z235 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3543D3Z235 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3543D3Z235 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Gm3543D3Z235 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3543D3Z235 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3543D3Z235 Gm12933-201ENSMUST00000120203 872 ntBASIC16.81■□□□□ 0.28
Gm3543D3Z235 Gm10602-201ENSMUST00000098239 609 ntBASIC16.81■□□□□ 0.28
Gm3543D3Z235 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3543D3Z235 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3543D3Z235 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Gm3543D3Z235 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3543D3Z235 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3543D3Z235 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3543D3Z235 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Gm3543D3Z235 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3543D3Z235 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3543D3Z235 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3543D3Z235 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3543D3Z235 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3543D3Z235 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.8■□□□□ 0.28
Gm3543D3Z235 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3543D3Z235 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3543D3Z235 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3543D3Z235 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3543D3Z235 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3543D3Z235 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3543D3Z235 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3543D3Z235 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3543D3Z235 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3543D3Z235 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3543D3Z235 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Gm3543D3Z235 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3543D3Z235 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3543D3Z235 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.79■□□□□ 0.28
Gm3543D3Z235 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3543D3Z235 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.79■□□□□ 0.28
Gm3543D3Z235 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.79■□□□□ 0.28
Gm3543D3Z235 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3543D3Z235 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3543D3Z235 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.79■□□□□ 0.28
Gm3543D3Z235 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3543D3Z235 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Gm3543D3Z235 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3543D3Z235 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3543D3Z235 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3543D3Z235 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3543D3Z235 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Gm3543D3Z235 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Gm3543D3Z235 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Gm3543D3Z235 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3543D3Z235 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Gm3543D3Z235 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
Gm3543D3Z235 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3543D3Z235 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Gm3543D3Z235 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.78■□□□□ 0.28
Gm3543D3Z235 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Gm3543D3Z235 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Gm3543D3Z235 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3543D3Z235 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3543D3Z235 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms