Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Syce3B5KM66 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.36■■□□□ 1.01
Syce3B5KM66 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Syce3B5KM66 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC21.36■■□□□ 1.01
Syce3B5KM66 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Syce3B5KM66 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Syce3B5KM66 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Syce3B5KM66 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.35■■□□□ 1.01
Syce3B5KM66 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Syce3B5KM66 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Syce3B5KM66 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.35■■□□□ 1.01
Syce3B5KM66 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.35■■□□□ 1.01
Syce3B5KM66 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Syce3B5KM66 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Syce3B5KM66 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Syce3B5KM66 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Syce3B5KM66 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Syce3B5KM66 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Syce3B5KM66 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.34■■□□□ 1.01
Syce3B5KM66 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
Syce3B5KM66 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Syce3B5KM66 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Syce3B5KM66 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Syce3B5KM66 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Syce3B5KM66 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Syce3B5KM66 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Syce3B5KM66 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Syce3B5KM66 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Syce3B5KM66 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Syce3B5KM66 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Syce3B5KM66 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Syce3B5KM66 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Syce3B5KM66 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Syce3B5KM66 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Syce3B5KM66 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Syce3B5KM66 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC21.33■■□□□ 1
Syce3B5KM66 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Syce3B5KM66 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Syce3B5KM66 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Syce3B5KM66 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Syce3B5KM66 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Syce3B5KM66 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Syce3B5KM66 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Syce3B5KM66 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC21.32■■□□□ 1
Syce3B5KM66 Fst-202ENSMUST00000223640 2612 ntBASIC21.32■■□□□ 1
Syce3B5KM66 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Syce3B5KM66 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
Syce3B5KM66 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.32■■□□□ 1
Syce3B5KM66 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Syce3B5KM66 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.32■■□□□ 1
Syce3B5KM66 Gm15820-201ENSMUST00000201566 728 ntBASIC21.32■■□□□ 1
Syce3B5KM66 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.32■■□□□ 1
Syce3B5KM66 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
Syce3B5KM66 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.32■■□□□ 1
Syce3B5KM66 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Syce3B5KM66 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Syce3B5KM66 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Syce3B5KM66 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Syce3B5KM66 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
Syce3B5KM66 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.31■■□□□ 1
Syce3B5KM66 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Syce3B5KM66 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.31■■□□□ 1
Syce3B5KM66 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC21.31■■□□□ 1
Syce3B5KM66 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Syce3B5KM66 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Syce3B5KM66 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC21.31■■□□□ 1
Syce3B5KM66 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Syce3B5KM66 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.31■■□□□ 1
Syce3B5KM66 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.31■■□□□ 1
Syce3B5KM66 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Syce3B5KM66 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
Syce3B5KM66 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Syce3B5KM66 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Syce3B5KM66 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Syce3B5KM66 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Syce3B5KM66 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC21.31■■□□□ 1
Syce3B5KM66 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Syce3B5KM66 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.31■■□□□ 1
Syce3B5KM66 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.31■■□□□ 1
Syce3B5KM66 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.3■■□□□ 1
Syce3B5KM66 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.3■■□□□ 1
Syce3B5KM66 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Syce3B5KM66 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Syce3B5KM66 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Syce3B5KM66 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Syce3B5KM66 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.3■■□□□ 1
Syce3B5KM66 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Syce3B5KM66 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.29■■□□□ 1
Syce3B5KM66 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.29■■□□□ 1
Syce3B5KM66 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Syce3B5KM66 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Syce3B5KM66 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Syce3B5KM66 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC21.29■■□□□ 1
Syce3B5KM66 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Syce3B5KM66 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.29■■□□□ 1
Syce3B5KM66 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.29■■□□□ 1
Syce3B5KM66 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.29■■□□□ 1
Syce3B5KM66 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Syce3B5KM66 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Syce3B5KM66 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms