Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Krt28A6BLY7 Gm13559-201ENSMUST00000120476 863 ntBASIC20.81■□□□□ 0.92
Krt28A6BLY7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Krt28A6BLY7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Krt28A6BLY7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.81■□□□□ 0.92
Krt28A6BLY7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.81■□□□□ 0.92
Krt28A6BLY7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt28A6BLY7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt28A6BLY7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Krt28A6BLY7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.81■□□□□ 0.92
Krt28A6BLY7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt28A6BLY7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt28A6BLY7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Krt28A6BLY7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Krt28A6BLY7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Krt28A6BLY7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Krt28A6BLY7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Krt28A6BLY7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Krt28A6BLY7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt28A6BLY7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt28A6BLY7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt28A6BLY7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt28A6BLY7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt28A6BLY7 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.79■□□□□ 0.92
Krt28A6BLY7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.79■□□□□ 0.92
Krt28A6BLY7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.79■□□□□ 0.92
Krt28A6BLY7 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.79■□□□□ 0.92
Krt28A6BLY7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt28A6BLY7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt28A6BLY7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt28A6BLY7 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt28A6BLY7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Krt28A6BLY7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt28A6BLY7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt28A6BLY7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt28A6BLY7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.78■□□□□ 0.92
Krt28A6BLY7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt28A6BLY7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.78■□□□□ 0.92
Krt28A6BLY7 Gm11539-201ENSMUST00000119837 557 ntBASIC20.78■□□□□ 0.92
Krt28A6BLY7 Gm13436-201ENSMUST00000120418 567 ntBASIC20.78■□□□□ 0.92
Krt28A6BLY7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Krt28A6BLY7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt28A6BLY7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Krt28A6BLY7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Krt28A6BLY7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt28A6BLY7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt28A6BLY7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt28A6BLY7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt28A6BLY7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.78■□□□□ 0.92
Krt28A6BLY7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Krt28A6BLY7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Krt28A6BLY7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Krt28A6BLY7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Krt28A6BLY7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Krt28A6BLY7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.77■□□□□ 0.92
Krt28A6BLY7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Krt28A6BLY7 Mtag2-201ENSMUST00000058665 714 ntBASIC20.77■□□□□ 0.92
Krt28A6BLY7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Krt28A6BLY7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Krt28A6BLY7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Krt28A6BLY7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.77■□□□□ 0.91
Krt28A6BLY7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Krt28A6BLY7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Krt28A6BLY7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Krt28A6BLY7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt28A6BLY7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.76■□□□□ 0.91
Krt28A6BLY7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt28A6BLY7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt28A6BLY7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Krt28A6BLY7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt28A6BLY7 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Krt28A6BLY7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt28A6BLY7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt28A6BLY7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Krt28A6BLY7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt28A6BLY7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.76■□□□□ 0.91
Krt28A6BLY7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt28A6BLY7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt28A6BLY7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt28A6BLY7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt28A6BLY7 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.75■□□□□ 0.91
Krt28A6BLY7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Krt28A6BLY7 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Krt28A6BLY7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt28A6BLY7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Krt28A6BLY7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt28A6BLY7 Gm27741-201ENSMUST00000185060 237 ntBASIC20.75■□□□□ 0.91
Krt28A6BLY7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.75■□□□□ 0.91
Krt28A6BLY7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Krt28A6BLY7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Krt28A6BLY7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Krt28A6BLY7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt28A6BLY7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt28A6BLY7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Krt28A6BLY7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Krt28A6BLY7 Gm7889-201ENSMUST00000185591 958 ntBASIC20.74■□□□□ 0.91
Krt28A6BLY7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt28A6BLY7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt28A6BLY7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Krt28A6BLY7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms