Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd6A3KFM7 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd6A3KFM7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd6A3KFM7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd6A3KFM7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd6A3KFM7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd6A3KFM7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd6A3KFM7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd6A3KFM7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd6A3KFM7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Chd6A3KFM7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd6A3KFM7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd6A3KFM7 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chd6A3KFM7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.28■□□□□ 0.04
Chd6A3KFM7 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chd6A3KFM7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd6A3KFM7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.28■□□□□ 0.04
Chd6A3KFM7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.28■□□□□ 0.04
Chd6A3KFM7 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chd6A3KFM7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd6A3KFM7 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Chd6A3KFM7 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.28■□□□□ 0.04
Chd6A3KFM7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.28■□□□□ 0.04
Chd6A3KFM7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chd6A3KFM7 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Chd6A3KFM7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.27■□□□□ 0.04
Chd6A3KFM7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chd6A3KFM7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Chd6A3KFM7 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Chd6A3KFM7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.27■□□□□ 0.04
Chd6A3KFM7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chd6A3KFM7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chd6A3KFM7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chd6A3KFM7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chd6A3KFM7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chd6A3KFM7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chd6A3KFM7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chd6A3KFM7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.27■□□□□ 0.03
Chd6A3KFM7 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.27■□□□□ 0.03
Chd6A3KFM7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chd6A3KFM7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chd6A3KFM7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chd6A3KFM7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC15.27■□□□□ 0.03
Chd6A3KFM7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Chd6A3KFM7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd6A3KFM7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd6A3KFM7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Chd6A3KFM7 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chd6A3KFM7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.26■□□□□ 0.03
Chd6A3KFM7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chd6A3KFM7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.26■□□□□ 0.03
Chd6A3KFM7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd6A3KFM7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Chd6A3KFM7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chd6A3KFM7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd6A3KFM7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd6A3KFM7 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd6A3KFM7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd6A3KFM7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd6A3KFM7 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.26■□□□□ 0.03
Chd6A3KFM7 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd6A3KFM7 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd6A3KFM7 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.26■□□□□ 0.03
Chd6A3KFM7 Gm7791-201ENSMUST00000219066 539 ntBASIC15.26■□□□□ 0.03
Chd6A3KFM7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd6A3KFM7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd6A3KFM7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd6A3KFM7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd6A3KFM7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chd6A3KFM7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.25■□□□□ 0.03
Chd6A3KFM7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chd6A3KFM7 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.25■□□□□ 0.03
Chd6A3KFM7 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chd6A3KFM7 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chd6A3KFM7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chd6A3KFM7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chd6A3KFM7 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chd6A3KFM7 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Chd6A3KFM7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.25■□□□□ 0.03
Chd6A3KFM7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Chd6A3KFM7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.25■□□□□ 0.03
Chd6A3KFM7 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chd6A3KFM7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chd6A3KFM7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd6A3KFM7 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chd6A3KFM7 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.24■□□□□ 0.03
Chd6A3KFM7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chd6A3KFM7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd6A3KFM7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd6A3KFM7 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.24■□□□□ 0.03
Chd6A3KFM7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd6A3KFM7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Chd6A3KFM7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chd6A3KFM7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd6A3KFM7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Chd6A3KFM7 Mir5130-201ENSMUST00000175160 84 ntBASIC15.23■□□□□ 0.03
Chd6A3KFM7 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.23■□□□□ 0.03
Chd6A3KFM7 Gm18025-201ENSMUST00000221733 862 ntBASIC15.23■□□□□ 0.03
Chd6A3KFM7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.23■□□□□ 0.03
Chd6A3KFM7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms