Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Shroom2A2ALU4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
Shroom2A2ALU4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC29.89■■■□□ 2.38
Shroom2A2ALU4 Gm10138-203ENSMUST00000206952 366 ntBASIC29.89■■■□□ 2.38
Shroom2A2ALU4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Shroom2A2ALU4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC29.89■■■□□ 2.38
Shroom2A2ALU4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Shroom2A2ALU4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Shroom2A2ALU4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Shroom2A2ALU4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Shroom2A2ALU4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Shroom2A2ALU4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Shroom2A2ALU4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Shroom2A2ALU4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Shroom2A2ALU4 Gm22697-201ENSMUST00000175194 63 ntBASIC29.87■■■□□ 2.37
Shroom2A2ALU4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC29.87■■■□□ 2.37
Shroom2A2ALU4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Shroom2A2ALU4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Shroom2A2ALU4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Shroom2A2ALU4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
Shroom2A2ALU4 Gm45560-201ENSMUST00000211492 1472 ntBASIC29.87■■■□□ 2.37
Shroom2A2ALU4 Gm15375-201ENSMUST00000119510 849 ntBASIC29.87■■■□□ 2.37
Shroom2A2ALU4 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Shroom2A2ALU4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Shroom2A2ALU4 Gm18958-201ENSMUST00000174258 762 ntBASIC29.86■■■□□ 2.37
Shroom2A2ALU4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC29.86■■■□□ 2.37
Shroom2A2ALU4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC29.86■■■□□ 2.37
Shroom2A2ALU4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC29.86■■■□□ 2.37
Shroom2A2ALU4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Shroom2A2ALU4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
Shroom2A2ALU4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Shroom2A2ALU4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Shroom2A2ALU4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Shroom2A2ALU4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
Shroom2A2ALU4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC29.85■■■□□ 2.37
Shroom2A2ALU4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC29.85■■■□□ 2.37
Shroom2A2ALU4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Shroom2A2ALU4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Shroom2A2ALU4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Shroom2A2ALU4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC29.84■■■□□ 2.37
Shroom2A2ALU4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Shroom2A2ALU4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Shroom2A2ALU4 Mtag2-201ENSMUST00000058665 714 ntBASIC29.84■■■□□ 2.37
Shroom2A2ALU4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Shroom2A2ALU4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC29.84■■■□□ 2.37
Shroom2A2ALU4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC29.84■■■□□ 2.37
Shroom2A2ALU4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Shroom2A2ALU4 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Shroom2A2ALU4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
Shroom2A2ALU4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Shroom2A2ALU4 Gm8258-201ENSMUST00000055593 1449 ntBASIC29.83■■■□□ 2.37
Shroom2A2ALU4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC29.83■■■□□ 2.37
Shroom2A2ALU4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Shroom2A2ALU4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
Shroom2A2ALU4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC29.83■■■□□ 2.37
Shroom2A2ALU4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Shroom2A2ALU4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
Shroom2A2ALU4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC29.82■■■□□ 2.36
Shroom2A2ALU4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
Shroom2A2ALU4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
Shroom2A2ALU4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Shroom2A2ALU4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Shroom2A2ALU4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
Shroom2A2ALU4 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
Shroom2A2ALU4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Shroom2A2ALU4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Shroom2A2ALU4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC29.81■■■□□ 2.36
Shroom2A2ALU4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC29.81■■■□□ 2.36
Shroom2A2ALU4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC29.81■■■□□ 2.36
Shroom2A2ALU4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Shroom2A2ALU4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Shroom2A2ALU4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC29.8■■■□□ 2.36
Shroom2A2ALU4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Shroom2A2ALU4 AC164629.2-201ENSMUST00000217916 270 ntBASIC29.8■■■□□ 2.36
Shroom2A2ALU4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Shroom2A2ALU4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
Shroom2A2ALU4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
Shroom2A2ALU4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
Shroom2A2ALU4 Gm27463-201ENSMUST00000183569 57 ntBASIC29.8■■■□□ 2.36
Shroom2A2ALU4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Shroom2A2ALU4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Shroom2A2ALU4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Shroom2A2ALU4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Shroom2A2ALU4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC29.79■■■□□ 2.36
Shroom2A2ALU4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Shroom2A2ALU4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC29.79■■■□□ 2.36
Shroom2A2ALU4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Shroom2A2ALU4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC29.79■■■□□ 2.36
Shroom2A2ALU4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Shroom2A2ALU4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Shroom2A2ALU4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Shroom2A2ALU4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Shroom2A2ALU4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Shroom2A2ALU4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Shroom2A2ALU4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC29.78■■■□□ 2.36
Shroom2A2ALU4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC29.78■■■□□ 2.36
Shroom2A2ALU4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Shroom2A2ALU4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC29.78■■■□□ 2.36
Shroom2A2ALU4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC29.78■■■□□ 2.36
Shroom2A2ALU4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms