Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcna-ps2A0A140T8V5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcna-ps2A0A140T8V5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcna-ps2A0A140T8V5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcna-ps2A0A140T8V5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcna-ps2A0A140T8V5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Pcna-ps2A0A140T8V5 Gm15039-201ENSMUST00000118914 875 ntBASIC18.73■□□□□ 0.59
Pcna-ps2A0A140T8V5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcna-ps2A0A140T8V5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcna-ps2A0A140T8V5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcna-ps2A0A140T8V5 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Pcna-ps2A0A140T8V5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcna-ps2A0A140T8V5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcna-ps2A0A140T8V5 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcna-ps2A0A140T8V5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcna-ps2A0A140T8V5 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pcna-ps2A0A140T8V5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.73■□□□□ 0.59
Pcna-ps2A0A140T8V5 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcna-ps2A0A140T8V5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcna-ps2A0A140T8V5 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.72■□□□□ 0.59
Pcna-ps2A0A140T8V5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcna-ps2A0A140T8V5 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
Pcna-ps2A0A140T8V5 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcna-ps2A0A140T8V5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.72■□□□□ 0.59
Pcna-ps2A0A140T8V5 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcna-ps2A0A140T8V5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcna-ps2A0A140T8V5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcna-ps2A0A140T8V5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcna-ps2A0A140T8V5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Pcna-ps2A0A140T8V5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcna-ps2A0A140T8V5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcna-ps2A0A140T8V5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Pcna-ps2A0A140T8V5 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcna-ps2A0A140T8V5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Pcna-ps2A0A140T8V5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Pcna-ps2A0A140T8V5 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcna-ps2A0A140T8V5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Pcna-ps2A0A140T8V5 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcna-ps2A0A140T8V5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcna-ps2A0A140T8V5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Pcna-ps2A0A140T8V5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcna-ps2A0A140T8V5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcna-ps2A0A140T8V5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcna-ps2A0A140T8V5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcna-ps2A0A140T8V5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcna-ps2A0A140T8V5 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcna-ps2A0A140T8V5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
Pcna-ps2A0A140T8V5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcna-ps2A0A140T8V5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.7■□□□□ 0.58
Pcna-ps2A0A140T8V5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcna-ps2A0A140T8V5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.7■□□□□ 0.58
Pcna-ps2A0A140T8V5 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcna-ps2A0A140T8V5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcna-ps2A0A140T8V5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcna-ps2A0A140T8V5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcna-ps2A0A140T8V5 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcna-ps2A0A140T8V5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcna-ps2A0A140T8V5 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcna-ps2A0A140T8V5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcna-ps2A0A140T8V5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcna-ps2A0A140T8V5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.69■□□□□ 0.58
Pcna-ps2A0A140T8V5 Gm9988-201ENSMUST00000069786 435 ntBASIC18.69■□□□□ 0.58
Pcna-ps2A0A140T8V5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcna-ps2A0A140T8V5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcna-ps2A0A140T8V5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcna-ps2A0A140T8V5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcna-ps2A0A140T8V5 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcna-ps2A0A140T8V5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcna-ps2A0A140T8V5 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcna-ps2A0A140T8V5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Pcna-ps2A0A140T8V5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcna-ps2A0A140T8V5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcna-ps2A0A140T8V5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcna-ps2A0A140T8V5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcna-ps2A0A140T8V5 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcna-ps2A0A140T8V5 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcna-ps2A0A140T8V5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcna-ps2A0A140T8V5 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcna-ps2A0A140T8V5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcna-ps2A0A140T8V5 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
Pcna-ps2A0A140T8V5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pcna-ps2A0A140T8V5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcna-ps2A0A140T8V5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcna-ps2A0A140T8V5 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.67■□□□□ 0.58
Pcna-ps2A0A140T8V5 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.67■□□□□ 0.58
Pcna-ps2A0A140T8V5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.67■□□□□ 0.58
Pcna-ps2A0A140T8V5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcna-ps2A0A140T8V5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcna-ps2A0A140T8V5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcna-ps2A0A140T8V5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcna-ps2A0A140T8V5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pcna-ps2A0A140T8V5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcna-ps2A0A140T8V5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcna-ps2A0A140T8V5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Pcna-ps2A0A140T8V5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcna-ps2A0A140T8V5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Pcna-ps2A0A140T8V5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pcna-ps2A0A140T8V5 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Pcna-ps2A0A140T8V5 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcna-ps2A0A140T8V5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms