Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Gm9207-201ENSMUST00000198773 1115 ntBASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Golgb1-201ENSMUST00000023534 498 ntBASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Gm9885-202ENSMUST00000186234 2209 ntBASIC12.84□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC12.83□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav13d-4A0A0G2JFX3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC12.83□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-4A0A0G2JFX3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13d-4A0A0G2JFX3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trav13d-4A0A0G2JFX3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Rarb-207ENSMUST00000225921 2756 ntBASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13d-4A0A0G2JFX3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms