Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav9-4A0A0B4J1K2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-4A0A0B4J1K2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-4A0A0B4J1K2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav9-4A0A0B4J1K2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Gm7514-201ENSMUST00000209475 934 ntBASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
Trav9-4A0A0B4J1K2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-4A0A0B4J1K2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav9-4A0A0B4J1K2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-4A0A0B4J1K2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-4A0A0B4J1K2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-4A0A0B4J1K2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav9-4A0A0B4J1K2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-4A0A0B4J1K2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-4A0A0B4J1K2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-4A0A0B4J1K2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.99□□□□□ -0.17
Trav9-4A0A0B4J1K2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-4A0A0B4J1K2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-4A0A0B4J1K2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav9-4A0A0B4J1K2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-4A0A0B4J1K2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-4A0A0B4J1K2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-4A0A0B4J1K2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-4A0A0B4J1K2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-4A0A0B4J1K2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-4A0A0B4J1K2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9-4A0A0B4J1K2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9-4A0A0B4J1K2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9-4A0A0B4J1K2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav9-4A0A0B4J1K2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9-4A0A0B4J1K2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9-4A0A0B4J1K2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9-4A0A0B4J1K2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Trav9-4A0A0B4J1K2 Gm13534-201ENSMUST00000121169 513 ntBASIC13.98□□□□□ -0.17
Trav9-4A0A0B4J1K2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9-4A0A0B4J1K2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav9-4A0A0B4J1K2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav9-4A0A0B4J1K2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9-4A0A0B4J1K2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Trav9-4A0A0B4J1K2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav9-4A0A0B4J1K2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9-4A0A0B4J1K2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9-4A0A0B4J1K2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav9-4A0A0B4J1K2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9-4A0A0B4J1K2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav9-4A0A0B4J1K2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9-4A0A0B4J1K2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9-4A0A0B4J1K2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13.98□□□□□ -0.17
Trav9-4A0A0B4J1K2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9-4A0A0B4J1K2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav9-4A0A0B4J1K2 Gm10616-201ENSMUST00000205285 2127 ntBASIC13.97□□□□□ -0.17
Trav9-4A0A0B4J1K2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9-4A0A0B4J1K2 Golph3-205ENSMUST00000228671 2842 ntBASIC13.97□□□□□ -0.17
Trav9-4A0A0B4J1K2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9-4A0A0B4J1K2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav9-4A0A0B4J1K2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9-4A0A0B4J1K2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9-4A0A0B4J1K2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9-4A0A0B4J1K2 Gm26971-201ENSMUST00000182423 1072 ntBASIC13.97□□□□□ -0.17
Trav9-4A0A0B4J1K2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.97□□□□□ -0.17
Trav9-4A0A0B4J1K2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav9-4A0A0B4J1K2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9-4A0A0B4J1K2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9-4A0A0B4J1K2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9-4A0A0B4J1K2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9-4A0A0B4J1K2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9-4A0A0B4J1K2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Trav9-4A0A0B4J1K2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9-4A0A0B4J1K2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav9-4A0A0B4J1K2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9-4A0A0B4J1K2 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.96□□□□□ -0.17
Trav9-4A0A0B4J1K2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9-4A0A0B4J1K2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms