Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.73■□□□□ 0.27
Trbv20A0A0B4J1H5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.73■□□□□ 0.27
Trbv20A0A0B4J1H5 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv20A0A0B4J1H5 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trbv20A0A0B4J1H5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv20A0A0B4J1H5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv20A0A0B4J1H5 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv20A0A0B4J1H5 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv20A0A0B4J1H5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv20A0A0B4J1H5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.72■□□□□ 0.27
Trbv20A0A0B4J1H5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv20A0A0B4J1H5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv20A0A0B4J1H5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv20A0A0B4J1H5 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv20A0A0B4J1H5 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv20A0A0B4J1H5 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.72■□□□□ 0.27
Trbv20A0A0B4J1H5 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv20A0A0B4J1H5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv20A0A0B4J1H5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv20A0A0B4J1H5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv20A0A0B4J1H5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv20A0A0B4J1H5 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv20A0A0B4J1H5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv20A0A0B4J1H5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv20A0A0B4J1H5 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv20A0A0B4J1H5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
Trbv20A0A0B4J1H5 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv20A0A0B4J1H5 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv20A0A0B4J1H5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv20A0A0B4J1H5 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Trbv20A0A0B4J1H5 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv20A0A0B4J1H5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv20A0A0B4J1H5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Trbv20A0A0B4J1H5 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv20A0A0B4J1H5 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.71■□□□□ 0.27
Trbv20A0A0B4J1H5 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.71■□□□□ 0.27
Trbv20A0A0B4J1H5 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv20A0A0B4J1H5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv20A0A0B4J1H5 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Trbv20A0A0B4J1H5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.71■□□□□ 0.27
Trbv20A0A0B4J1H5 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv20A0A0B4J1H5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Trbv20A0A0B4J1H5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv20A0A0B4J1H5 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv20A0A0B4J1H5 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv20A0A0B4J1H5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv20A0A0B4J1H5 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trbv20A0A0B4J1H5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv20A0A0B4J1H5 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trbv20A0A0B4J1H5 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trbv20A0A0B4J1H5 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.7■□□□□ 0.26
Trbv20A0A0B4J1H5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trbv20A0A0B4J1H5 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv20A0A0B4J1H5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv20A0A0B4J1H5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv20A0A0B4J1H5 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv20A0A0B4J1H5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.7■□□□□ 0.26
Trbv20A0A0B4J1H5 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv20A0A0B4J1H5 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv20A0A0B4J1H5 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Trbv20A0A0B4J1H5 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv20A0A0B4J1H5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trbv20A0A0B4J1H5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv20A0A0B4J1H5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv20A0A0B4J1H5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv20A0A0B4J1H5 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv20A0A0B4J1H5 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv20A0A0B4J1H5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trbv20A0A0B4J1H5 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv20A0A0B4J1H5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv20A0A0B4J1H5 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv20A0A0B4J1H5 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv20A0A0B4J1H5 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv20A0A0B4J1H5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv20A0A0B4J1H5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trbv20A0A0B4J1H5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv20A0A0B4J1H5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv20A0A0B4J1H5 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.69■□□□□ 0.26
Trbv20A0A0B4J1H5 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv20A0A0B4J1H5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trbv20A0A0B4J1H5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv20A0A0B4J1H5 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv20A0A0B4J1H5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.69■□□□□ 0.26
Trbv20A0A0B4J1H5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv20A0A0B4J1H5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv20A0A0B4J1H5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv20A0A0B4J1H5 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv20A0A0B4J1H5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv20A0A0B4J1H5 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trbv20A0A0B4J1H5 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv20A0A0B4J1H5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv20A0A0B4J1H5 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trbv20A0A0B4J1H5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv20A0A0B4J1H5 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv20A0A0B4J1H5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv20A0A0B4J1H5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv20A0A0B4J1H5 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.68■□□□□ 0.26
Trbv20A0A0B4J1H5 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv20A0A0B4J1H5 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
Trbv20A0A0B4J1H5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms