Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav18A0A075B656 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav18A0A075B656 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav18A0A075B656 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav18A0A075B656 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav18A0A075B656 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav18A0A075B656 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav18A0A075B656 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.28■□□□□ 0.04
Trav18A0A075B656 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav18A0A075B656 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav18A0A075B656 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trav18A0A075B656 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav18A0A075B656 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav18A0A075B656 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav18A0A075B656 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Trav18A0A075B656 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav18A0A075B656 Gm27801-201ENSMUST00000184174 223 ntBASIC15.28■□□□□ 0.04
Trav18A0A075B656 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav18A0A075B656 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav18A0A075B656 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav18A0A075B656 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav18A0A075B656 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.28■□□□□ 0.04
Trav18A0A075B656 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav18A0A075B656 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav18A0A075B656 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav18A0A075B656 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav18A0A075B656 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav18A0A075B656 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav18A0A075B656 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav18A0A075B656 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav18A0A075B656 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav18A0A075B656 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav18A0A075B656 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav18A0A075B656 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav18A0A075B656 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav18A0A075B656 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav18A0A075B656 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav18A0A075B656 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.27■□□□□ 0.03
Trav18A0A075B656 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav18A0A075B656 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav18A0A075B656 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav18A0A075B656 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav18A0A075B656 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav18A0A075B656 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav18A0A075B656 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Trav18A0A075B656 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav18A0A075B656 Gm27454-201ENSMUST00000185090 204 ntBASIC15.26■□□□□ 0.03
Trav18A0A075B656 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav18A0A075B656 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav18A0A075B656 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav18A0A075B656 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav18A0A075B656 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav18A0A075B656 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav18A0A075B656 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav18A0A075B656 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav18A0A075B656 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav18A0A075B656 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav18A0A075B656 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav18A0A075B656 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav18A0A075B656 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav18A0A075B656 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav18A0A075B656 Grk6-206ENSMUST00000224995 2971 ntBASIC15.25■□□□□ 0.03
Trav18A0A075B656 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trav18A0A075B656 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav18A0A075B656 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav18A0A075B656 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav18A0A075B656 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav18A0A075B656 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.25■□□□□ 0.03
Trav18A0A075B656 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trav18A0A075B656 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav18A0A075B656 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav18A0A075B656 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav18A0A075B656 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav18A0A075B656 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Trav18A0A075B656 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav18A0A075B656 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav18A0A075B656 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav18A0A075B656 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav18A0A075B656 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav18A0A075B656 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav18A0A075B656 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav18A0A075B656 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.24■□□□□ 0.03
Trav18A0A075B656 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav18A0A075B656 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav18A0A075B656 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav18A0A075B656 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav18A0A075B656 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.24■□□□□ 0.03
Trav18A0A075B656 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav18A0A075B656 Gm40848-201ENSMUST00000221998 324 ntBASIC15.24■□□□□ 0.03
Trav18A0A075B656 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav18A0A075B656 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.24■□□□□ 0.03
Trav18A0A075B656 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav18A0A075B656 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav18A0A075B656 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav18A0A075B656 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav18A0A075B656 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav18A0A075B656 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav18A0A075B656 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav18A0A075B656 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav18A0A075B656 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms