Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav16A0A075B653 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16A0A075B653 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16A0A075B653 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16A0A075B653 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16A0A075B653 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.45□□□□□ -0.1
Trav16A0A075B653 Fst-202ENSMUST00000223640 2612 ntBASIC14.45□□□□□ -0.1
Trav16A0A075B653 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16A0A075B653 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16A0A075B653 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16A0A075B653 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.45□□□□□ -0.1
Trav16A0A075B653 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16A0A075B653 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16A0A075B653 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16A0A075B653 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16A0A075B653 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16A0A075B653 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16A0A075B653 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav16A0A075B653 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16A0A075B653 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16A0A075B653 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav16A0A075B653 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16A0A075B653 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16A0A075B653 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav16A0A075B653 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16A0A075B653 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16A0A075B653 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16A0A075B653 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16A0A075B653 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16A0A075B653 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16A0A075B653 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.43□□□□□ -0.1
Trav16A0A075B653 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trav16A0A075B653 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16A0A075B653 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trav16A0A075B653 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16A0A075B653 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav16A0A075B653 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Trav16A0A075B653 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16A0A075B653 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav16A0A075B653 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16A0A075B653 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16A0A075B653 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16A0A075B653 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16A0A075B653 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16A0A075B653 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16A0A075B653 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16A0A075B653 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.42□□□□□ -0.1
Trav16A0A075B653 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Trav16A0A075B653 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16A0A075B653 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav16A0A075B653 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16A0A075B653 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.42□□□□□ -0.1
Trav16A0A075B653 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16A0A075B653 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav16A0A075B653 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16A0A075B653 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.42□□□□□ -0.1
Trav16A0A075B653 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav16A0A075B653 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav16A0A075B653 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav16A0A075B653 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav16A0A075B653 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav16A0A075B653 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav16A0A075B653 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.41□□□□□ -0.1
Trav16A0A075B653 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav16A0A075B653 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav16A0A075B653 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav16A0A075B653 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav16A0A075B653 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav16A0A075B653 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav16A0A075B653 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Trav16A0A075B653 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav16A0A075B653 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav16A0A075B653 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav16A0A075B653 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav16A0A075B653 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav16A0A075B653 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav16A0A075B653 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav16A0A075B653 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.4□□□□□ -0.1
Trav16A0A075B653 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav16A0A075B653 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav16A0A075B653 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav16A0A075B653 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav16A0A075B653 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav16A0A075B653 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav16A0A075B653 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav16A0A075B653 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav16A0A075B653 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav16A0A075B653 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav16A0A075B653 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav16A0A075B653 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav16A0A075B653 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav16A0A075B653 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav16A0A075B653 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav16A0A075B653 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Trav16A0A075B653 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav16A0A075B653 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC14.39□□□□□ -0.11
Trav16A0A075B653 Gm7417-201ENSMUST00000192950 473 ntBASIC14.39□□□□□ -0.11
Trav16A0A075B653 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.39□□□□□ -0.11
Trav16A0A075B653 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav16A0A075B653 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms