Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13-1A0A075B644 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13-1A0A075B644 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav13-1A0A075B644 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav13-1A0A075B644 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.26□□□□□ -0.29
Trav13-1A0A075B644 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Trav13-1A0A075B644 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav13-1A0A075B644 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13-1A0A075B644 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13-1A0A075B644 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13-1A0A075B644 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13-1A0A075B644 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13-1A0A075B644 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13-1A0A075B644 Gm5112-201ENSMUST00000204407 2368 ntBASIC13.25□□□□□ -0.29
Trav13-1A0A075B644 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-1A0A075B644 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-1A0A075B644 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-1A0A075B644 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-1A0A075B644 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-1A0A075B644 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav13-1A0A075B644 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav13-1A0A075B644 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-1A0A075B644 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav13-1A0A075B644 Gm7860-201ENSMUST00000121190 879 ntBASIC13.25□□□□□ -0.29
Trav13-1A0A075B644 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-1A0A075B644 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav13-1A0A075B644 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-1A0A075B644 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.25□□□□□ -0.29
Trav13-1A0A075B644 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.25□□□□□ -0.29
Trav13-1A0A075B644 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-1A0A075B644 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-1A0A075B644 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav13-1A0A075B644 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav13-1A0A075B644 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav13-1A0A075B644 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav13-1A0A075B644 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-1A0A075B644 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13-1A0A075B644 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav13-1A0A075B644 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13-1A0A075B644 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13-1A0A075B644 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13-1A0A075B644 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13-1A0A075B644 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13-1A0A075B644 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13-1A0A075B644 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13-1A0A075B644 Gm12933-201ENSMUST00000120203 872 ntBASIC13.24□□□□□ -0.29
Trav13-1A0A075B644 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav13-1A0A075B644 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav13-1A0A075B644 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13-1A0A075B644 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13.24□□□□□ -0.29
Trav13-1A0A075B644 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13-1A0A075B644 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav13-1A0A075B644 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13-1A0A075B644 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13-1A0A075B644 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav13-1A0A075B644 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13-1A0A075B644 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13-1A0A075B644 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav13-1A0A075B644 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav13-1A0A075B644 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13-1A0A075B644 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.23□□□□□ -0.29
Trav13-1A0A075B644 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav13-1A0A075B644 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav13-1A0A075B644 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.23□□□□□ -0.29
Trav13-1A0A075B644 Gm13146-201ENSMUST00000118508 780 ntBASIC13.23□□□□□ -0.29
Trav13-1A0A075B644 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav13-1A0A075B644 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Trav13-1A0A075B644 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13-1A0A075B644 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13-1A0A075B644 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13-1A0A075B644 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav13-1A0A075B644 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13-1A0A075B644 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13-1A0A075B644 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav13-1A0A075B644 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Trav13-1A0A075B644 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav13-1A0A075B644 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav13-1A0A075B644 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13-1A0A075B644 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13-1A0A075B644 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13-1A0A075B644 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13-1A0A075B644 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13-1A0A075B644 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13-1A0A075B644 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13-1A0A075B644 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13-1A0A075B644 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13-1A0A075B644 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13-1A0A075B644 Mir5133-201ENSMUST00000174955 77 ntBASIC13.21□□□□□ -0.29
Trav13-1A0A075B644 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav13-1A0A075B644 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13-1A0A075B644 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav13-1A0A075B644 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13-1A0A075B644 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13-1A0A075B644 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13-1A0A075B644 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13-1A0A075B644 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13-1A0A075B644 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13-1A0A075B644 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13-1A0A075B644 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13-1A0A075B644 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms