Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 Gm6085-201ENSMUST00000182774 1470 ntBASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-6A0A075B603 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav6-6A0A075B603 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Trav6-6A0A075B603 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Trav6-6A0A075B603 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-6A0A075B603 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-6A0A075B603 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav6-6A0A075B603 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-6A0A075B603 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-6A0A075B603 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-6A0A075B603 AA386476-201ENSMUST00000098781 1665 ntBASIC13.89□□□□□ -0.19
Trav6-6A0A075B603 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav6-6A0A075B603 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-6A0A075B603 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-6A0A075B603 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-6A0A075B603 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-6A0A075B603 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trav6-6A0A075B603 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-6A0A075B603 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.89□□□□□ -0.19
Trav6-6A0A075B603 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-6A0A075B603 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-6A0A075B603 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-6A0A075B603 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-6A0A075B603 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-6A0A075B603 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Trav6-6A0A075B603 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-6A0A075B603 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-6A0A075B603 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-6A0A075B603 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-6A0A075B603 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-6A0A075B603 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-6A0A075B603 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-6A0A075B603 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav6-6A0A075B603 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC13.88□□□□□ -0.19
Trav6-6A0A075B603 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-6A0A075B603 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-6A0A075B603 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav6-6A0A075B603 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav6-6A0A075B603 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav6-6A0A075B603 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.88□□□□□ -0.19
Trav6-6A0A075B603 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-6A0A075B603 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav6-6A0A075B603 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC13.87□□□□□ -0.19
Trav6-6A0A075B603 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-6A0A075B603 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.87□□□□□ -0.19
Trav6-6A0A075B603 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav6-6A0A075B603 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-6A0A075B603 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-6A0A075B603 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-6A0A075B603 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-6A0A075B603 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-6A0A075B603 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-6A0A075B603 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-6A0A075B603 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-6A0A075B603 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-6A0A075B603 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-6A0A075B603 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-6A0A075B603 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.87□□□□□ -0.19
Trav6-6A0A075B603 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-6A0A075B603 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Trav6-6A0A075B603 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-6A0A075B603 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-6A0A075B603 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-6A0A075B603 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-6A0A075B603 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trav6-6A0A075B603 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-6A0A075B603 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav6-6A0A075B603 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-6A0A075B603 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-6A0A075B603 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-6A0A075B603 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-6A0A075B603 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC13.86□□□□□ -0.19
Trav6-6A0A075B603 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-6A0A075B603 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav6-6A0A075B603 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Trav6-6A0A075B603 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-6A0A075B603 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav6-6A0A075B603 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-6A0A075B603 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-6A0A075B603 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-6A0A075B603 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-6A0A075B603 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-6A0A075B603 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-6A0A075B603 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-6A0A075B603 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-6A0A075B603 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-6A0A075B603 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Trav6-6A0A075B603 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms