Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-1A0A075B5Z8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-1A0A075B5Z8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-1A0A075B5Z8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-1A0A075B5Z8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-1A0A075B5Z8 Gm7860-201ENSMUST00000121190 879 ntBASIC15□□□□□ -0.01
Trav6-1A0A075B5Z8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15□□□□□ -0.01
Trav6-1A0A075B5Z8 Gm45102-201ENSMUST00000207427 857 ntBASIC15□□□□□ -0.01
Trav6-1A0A075B5Z8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-1A0A075B5Z8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15□□□□□ -0.01
Trav6-1A0A075B5Z8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav6-1A0A075B5Z8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-1A0A075B5Z8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Trav6-1A0A075B5Z8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-1A0A075B5Z8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-1A0A075B5Z8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-1A0A075B5Z8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-1A0A075B5Z8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6-1A0A075B5Z8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Trav6-1A0A075B5Z8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-1A0A075B5Z8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.99□□□□□ -0.01
Trav6-1A0A075B5Z8 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.99□□□□□ -0.01
Trav6-1A0A075B5Z8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-1A0A075B5Z8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-1A0A075B5Z8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.99□□□□□ -0.01
Trav6-1A0A075B5Z8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav6-1A0A075B5Z8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-1A0A075B5Z8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-1A0A075B5Z8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-1A0A075B5Z8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav6-1A0A075B5Z8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-1A0A075B5Z8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-1A0A075B5Z8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-1A0A075B5Z8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.98□□□□□ -0.01
Trav6-1A0A075B5Z8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.98□□□□□ -0.01
Trav6-1A0A075B5Z8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-1A0A075B5Z8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-1A0A075B5Z8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-1A0A075B5Z8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-1A0A075B5Z8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-1A0A075B5Z8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-1A0A075B5Z8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-1A0A075B5Z8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-1A0A075B5Z8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-1A0A075B5Z8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-1A0A075B5Z8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-1A0A075B5Z8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Trav6-1A0A075B5Z8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-1A0A075B5Z8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Trav6-1A0A075B5Z8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-1A0A075B5Z8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav6-1A0A075B5Z8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-1A0A075B5Z8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Trav6-1A0A075B5Z8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-1A0A075B5Z8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav6-1A0A075B5Z8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav6-1A0A075B5Z8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Trav6-1A0A075B5Z8 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.96□□□□□ -0.02
Trav6-1A0A075B5Z8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav6-1A0A075B5Z8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-1A0A075B5Z8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-1A0A075B5Z8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-1A0A075B5Z8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-1A0A075B5Z8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-1A0A075B5Z8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-1A0A075B5Z8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-1A0A075B5Z8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-1A0A075B5Z8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-1A0A075B5Z8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-1A0A075B5Z8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-1A0A075B5Z8 Rps24-207ENSMUST00000224568 714 ntBASIC14.95□□□□□ -0.02
Trav6-1A0A075B5Z8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-1A0A075B5Z8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-1A0A075B5Z8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-1A0A075B5Z8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-1A0A075B5Z8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-1A0A075B5Z8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms