Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC9.73□□□□□ -0.85
Sf3a1Q8K4Z5 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3a1Q8K4Z5 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC9.73□□□□□ -0.85
Sf3a1Q8K4Z5 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC9.73□□□□□ -0.85
Sf3a1Q8K4Z5 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3a1Q8K4Z5 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3a1Q8K4Z5 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3a1Q8K4Z5 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC9.73□□□□□ -0.85
Sf3a1Q8K4Z5 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Sf3a1Q8K4Z5 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3a1Q8K4Z5 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3a1Q8K4Z5 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3a1Q8K4Z5 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Sf3a1Q8K4Z5 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC9.73□□□□□ -0.85
Sf3a1Q8K4Z5 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3a1Q8K4Z5 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sf3a1Q8K4Z5 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Zc2hc1c-201ENSMUST00000059341 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Kbtbd4-201ENSMUST00000090682 2437 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Gm37334-201ENSMUST00000192325 2938 ntBASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Efcab9-202ENSMUST00000109377 615 ntAPPRIS ALT2 TSL 3 BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Gm14519-201ENSMUST00000118490 312 ntBASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Gm12870-201ENSMUST00000121383 1016 ntBASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Gm11588-201ENSMUST00000141758 658 ntTSL 5 BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Gm12126-201ENSMUST00000147717 619 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Gm20396-201ENSMUST00000173358 745 ntBASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 4921523L03Rik-201ENSMUST00000175729 1186 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Gm18351-201ENSMUST00000188646 883 ntBASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Gm37247-201ENSMUST00000192549 730 ntBASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Mir7230-201ENSMUST00000195977 56 ntBASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Gm44764-202ENSMUST00000204912 671 ntTSL 3 BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Gm26264-201ENSMUST00000083278 159 ntBASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Olfr467-202ENSMUST00000208563 1852 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Olfr467-203ENSMUST00000214253 1855 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sf3a1Q8K4Z5 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Sf3a1Q8K4Z5 Gm37647-201ENSMUST00000194556 3143 ntBASIC9.71□□□□□ -0.85
Sf3a1Q8K4Z5 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
Sf3a1Q8K4Z5 Gm28427-201ENSMUST00000190144 2162 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Sf3a1Q8K4Z5 Gm38072-201ENSMUST00000192127 2162 ntTSL 5 BASIC9.71□□□□□ -0.85
Sf3a1Q8K4Z5 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sf3a1Q8K4Z5 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sf3a1Q8K4Z5 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sf3a1Q8K4Z5 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sf3a1Q8K4Z5 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Sf3a1Q8K4Z5 Olfr1115-203ENSMUST00000214119 2455 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Sf3a1Q8K4Z5 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC9.71□□□□□ -0.85
Sf3a1Q8K4Z5 Gm24472-201ENSMUST00000104484 132 ntBASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 Gm24994-201ENSMUST00000157414 121 ntBASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 Gm7678-201ENSMUST00000181879 943 ntBASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 Gm29144-201ENSMUST00000189235 339 ntBASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 Gm29238-201ENSMUST00000189709 695 ntBASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 Gm28607-201ENSMUST00000190142 339 ntBASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 Gm28121-201ENSMUST00000191420 339 ntBASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 Gm38047-201ENSMUST00000193690 1133 ntBASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 Gm42464-201ENSMUST00000196717 417 ntBASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 Gm42977-201ENSMUST00000197497 144 ntBASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 Gm6909-201ENSMUST00000209825 989 ntBASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 AC121788.2-201ENSMUST00000218284 1255 ntTSL 5 BASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 Gm6991-201ENSMUST00000218475 1178 ntBASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 AC125543.2-201ENSMUST00000222114 105 ntBASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 CT030170.7-201ENSMUST00000223372 103 ntBASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 Lcn11-201ENSMUST00000091278 652 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 Gm37066-201ENSMUST00000192713 2061 ntBASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Sf3a1Q8K4Z5 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms