Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 AC154355.1-201ENSMUST00000224604 2162 ntBASIC9.2□□□□□ -0.94
Alx1Q8C8B0 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Alx1Q8C8B0 Slc2a3-201ENSMUST00000032476 3959 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Alx1Q8C8B0 Olfr702-204ENSMUST00000219803 1646 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Alx1Q8C8B0 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Alx1Q8C8B0 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Alx1Q8C8B0 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Gm8204-201ENSMUST00000185696 2144 ntBASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Gm10764-202ENSMUST00000220397 2335 ntBASIC9.19□□□□□ -0.94
Alx1Q8C8B0 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Chrnb4-201ENSMUST00000034854 3723 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Gm13858-201ENSMUST00000118862 671 ntBASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Gm14450-201ENSMUST00000119984 240 ntBASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Gm13495-201ENSMUST00000121156 537 ntBASIC9.19□□□□□ -0.94
Alx1Q8C8B0 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Gm10086-201ENSMUST00000136334 354 ntBASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Traj54-201ENSMUST00000165071 54 ntBASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Gm4781-201ENSMUST00000167995 781 ntBASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Gm29195-201ENSMUST00000189038 379 ntBASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Gm5307-201ENSMUST00000204772 760 ntBASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Gm45074-201ENSMUST00000209091 1240 ntBASIC9.19□□□□□ -0.94
Alx1Q8C8B0 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Gm9801-201ENSMUST00000054860 408 ntBASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Rapgef5-206ENSMUST00000222185 5508 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Tmem175-202ENSMUST00000078323 2374 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Alx1Q8C8B0 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Gm37633-201ENSMUST00000192858 2700 ntBASIC9.18□□□□□ -0.94
Alx1Q8C8B0 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Kat6b-209ENSMUST00000182964 7699 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Rora-201ENSMUST00000034766 10878 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Ablim1-207ENSMUST00000111529 5927 ntTSL 5 BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Cd300lb-203ENSMUST00000149663 2641 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Gm24530-201ENSMUST00000157948 288 ntBASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Gm25437-201ENSMUST00000158282 132 ntBASIC9.18□□□□□ -0.94
Alx1Q8C8B0 3830406C13Rik-202ENSMUST00000163392 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Gm10012-202ENSMUST00000170379 372 ntBASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Gm15251-201ENSMUST00000177947 883 ntBASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Gm26785-201ENSMUST00000181775 2914 ntTSL 3 BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Mir6340-201ENSMUST00000183857 119 ntBASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Ighv1-38-201ENSMUST00000192755 349 ntBASIC9.18□□□□□ -0.94
Alx1Q8C8B0 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Gm42576-201ENSMUST00000202336 2846 ntBASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Gm5605-201ENSMUST00000208940 1305 ntBASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Gm8575-201ENSMUST00000210262 521 ntBASIC9.18□□□□□ -0.94
Alx1Q8C8B0 AC126939.4-201ENSMUST00000225360 743 ntBASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Mkrn2-201ENSMUST00000000449 6230 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Map4k4-209ENSMUST00000192509 3918 ntAPPRIS P3 TSL 2 BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Katnb1-201ENSMUST00000034239 3777 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Rab11b-201ENSMUST00000057373 6109 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Nrxn3-205ENSMUST00000163134 7922 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Alx1Q8C8B0 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Gm5402-201ENSMUST00000119588 1618 ntBASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms