Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm23437-201ENSMUST00000104036 127 ntBASIC11.06□□□□□ -0.64
Usp54Q8BL06 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Usp54Q8BL06 Gm12635-201ENSMUST00000117285 752 ntBASIC11.06□□□□□ -0.64
Usp54Q8BL06 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC11.06□□□□□ -0.64
Usp54Q8BL06 Gm2619-202ENSMUST00000166777 651 ntBASIC11.06□□□□□ -0.64
Usp54Q8BL06 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC11.06□□□□□ -0.64
Usp54Q8BL06 Gm27373-201ENSMUST00000184017 184 ntBASIC11.06□□□□□ -0.64
Usp54Q8BL06 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC11.06□□□□□ -0.64
Usp54Q8BL06 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC11.06□□□□□ -0.64
Usp54Q8BL06 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Usp54Q8BL06 AC108947.1-201ENSMUST00000224274 1000 ntBASIC11.06□□□□□ -0.64
Usp54Q8BL06 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Usp54Q8BL06 AC123705.1-201ENSMUST00000222512 2058 ntBASIC11.06□□□□□ -0.64
Usp54Q8BL06 Gm37995-201ENSMUST00000194958 1714 ntBASIC11.06□□□□□ -0.64
Usp54Q8BL06 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Usp54Q8BL06 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC11.06□□□□□ -0.64
Usp54Q8BL06 Gm29154-211ENSMUST00000213655 1499 ntTSL 5 BASIC11.06□□□□□ -0.64
Usp54Q8BL06 Ggt5-201ENSMUST00000072217 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Usp54Q8BL06 Emc1-205ENSMUST00000179784 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Usp54Q8BL06 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Usp54Q8BL06 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Usp54Q8BL06 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Usp54Q8BL06 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Usp54Q8BL06 Card11-201ENSMUST00000085786 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Usp54Q8BL06 Tnr-201ENSMUST00000111669 4424 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Usp54Q8BL06 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Usp54Q8BL06 Ccdc77-201ENSMUST00000032283 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Usp54Q8BL06 Pcdhb8-201ENSMUST00000051163 3334 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Usp54Q8BL06 Gm13486-201ENSMUST00000119910 282 ntBASIC11.05□□□□□ -0.64
Usp54Q8BL06 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Usp54Q8BL06 Gm24050-201ENSMUST00000158623 290 ntBASIC11.05□□□□□ -0.64
Usp54Q8BL06 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC11.05□□□□□ -0.64
Usp54Q8BL06 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Usp54Q8BL06 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Usp54Q8BL06 Gm29144-201ENSMUST00000189235 339 ntBASIC11.05□□□□□ -0.64
Usp54Q8BL06 Gm29238-201ENSMUST00000189709 695 ntBASIC11.05□□□□□ -0.64
Usp54Q8BL06 Gm28607-201ENSMUST00000190142 339 ntBASIC11.05□□□□□ -0.64
Usp54Q8BL06 Gm28121-201ENSMUST00000191420 339 ntBASIC11.05□□□□□ -0.64
Usp54Q8BL06 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC11.05□□□□□ -0.64
Usp54Q8BL06 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Usp54Q8BL06 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Usp54Q8BL06 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC11.05□□□□□ -0.64
Usp54Q8BL06 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Usp54Q8BL06 Dusp27-202ENSMUST00000192369 4045 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Usp54Q8BL06 Psmb11-201ENSMUST00000097177 4247 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Usp54Q8BL06 Zfp541-201ENSMUST00000108509 4561 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Usp54Q8BL06 Nlrc5-204ENSMUST00000182409 4552 ntTSL 5 BASIC11.05□□□□□ -0.64
Usp54Q8BL06 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Usp54Q8BL06 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Usp54Q8BL06 AC158686.1-201ENSMUST00000218068 2332 ntBASIC11.05□□□□□ -0.64
Usp54Q8BL06 Gm10623-201ENSMUST00000209081 2639 ntBASIC11.04□□□□□ -0.64
Usp54Q8BL06 Ston1-205ENSMUST00000150023 3231 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Usp54Q8BL06 Sec23ip-201ENSMUST00000042942 4505 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Usp54Q8BL06 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Usp54Q8BL06 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Usp54Q8BL06 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Usp54Q8BL06 Gm15709-201ENSMUST00000118354 213 ntBASIC11.04□□□□□ -0.64
Usp54Q8BL06 Gm11416-201ENSMUST00000119111 863 ntBASIC11.04□□□□□ -0.64
Usp54Q8BL06 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Usp54Q8BL06 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC11.04□□□□□ -0.64
Usp54Q8BL06 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Usp54Q8BL06 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC11.04□□□□□ -0.64
Usp54Q8BL06 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC11.04□□□□□ -0.64
Usp54Q8BL06 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Usp54Q8BL06 Gm8479-201ENSMUST00000203825 718 ntBASIC11.04□□□□□ -0.64
Usp54Q8BL06 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC11.04□□□□□ -0.64
Usp54Q8BL06 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Usp54Q8BL06 AC162934.2-201ENSMUST00000221451 249 ntBASIC11.04□□□□□ -0.64
Usp54Q8BL06 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Usp54Q8BL06 Palb2-202ENSMUST00000098068 3750 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Usp54Q8BL06 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Usp54Q8BL06 A830036E02Rik-204ENSMUST00000139095 3413 ntTSL 2 BASIC11.04□□□□□ -0.64
Usp54Q8BL06 Brd8-204ENSMUST00000115766 4258 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Usp54Q8BL06 Frrs1-201ENSMUST00000040260 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Usp54Q8BL06 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Usp54Q8BL06 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC11.04□□□□□ -0.64
Usp54Q8BL06 Tbc1d24-214ENSMUST00000201960 4305 ntTSL 5 BASIC11.04□□□□□ -0.64
Usp54Q8BL06 Ntsr1-201ENSMUST00000029084 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Usp54Q8BL06 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Usp54Q8BL06 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Usp54Q8BL06 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Usp54Q8BL06 Arpp19-205ENSMUST00000168166 3944 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Usp54Q8BL06 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Usp54Q8BL06 Gm9311-201ENSMUST00000118042 1269 ntBASIC11.03□□□□□ -0.64
Usp54Q8BL06 Gm13156-201ENSMUST00000118348 321 ntBASIC11.03□□□□□ -0.64
Usp54Q8BL06 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC11.03□□□□□ -0.64
Usp54Q8BL06 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC11.03□□□□□ -0.64
Usp54Q8BL06 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Usp54Q8BL06 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC11.03□□□□□ -0.64
Usp54Q8BL06 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Usp54Q8BL06 Mir6908-201ENSMUST00000184056 63 ntBASIC11.03□□□□□ -0.64
Usp54Q8BL06 Gm8004-201ENSMUST00000187782 617 ntBASIC11.03□□□□□ -0.64
Usp54Q8BL06 Gm29369-201ENSMUST00000190674 615 ntBASIC11.03□□□□□ -0.64
Usp54Q8BL06 Gm36928-201ENSMUST00000192466 694 ntBASIC11.03□□□□□ -0.64
Usp54Q8BL06 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Usp54Q8BL06 Gm37325-201ENSMUST00000194971 694 ntBASIC11.03□□□□□ -0.64
Usp54Q8BL06 Gm37841-201ENSMUST00000195367 376 ntBASIC11.03□□□□□ -0.64
Usp54Q8BL06 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Usp54Q8BL06 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC11.03□□□□□ -0.64
Usp54Q8BL06 Gm44561-201ENSMUST00000208869 264 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms