Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 Gm13163-201ENSMUST00000119875 336 ntBASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 Gm14450-201ENSMUST00000119984 240 ntBASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 n-R5s115-201ENSMUST00000179019 119 ntBASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 Gm27458-201ENSMUST00000185108 121 ntBASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 Gm17867-201ENSMUST00000188981 391 ntBASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 Gm43040-201ENSMUST00000202399 558 ntBASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 CT010480.3-201ENSMUST00000224712 259 ntBASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 AC154760.1-201ENSMUST00000227218 673 ntBASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 n-R5s193-201ENSMUST00000082864 109 ntBASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 Mir146b-201ENSMUST00000093619 109 ntBASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 Gm8836-201ENSMUST00000198196 1348 ntBASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 Gm37426-201ENSMUST00000195241 2470 ntBASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 Stil-201ENSMUST00000030490 5285 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ccdc88cQ6VGS5 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 Patj-207ENSMUST00000107034 4799 ntTSL 5 BASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 Gm16487-201ENSMUST00000105048 4037 ntBASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 Myadm-204ENSMUST00000203566 4028 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 Crb1-201ENSMUST00000059825 5901 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 Gm36993-201ENSMUST00000192983 2980 ntBASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 Gm33778-201ENSMUST00000216884 704 ntBASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 AC125543.2-201ENSMUST00000222114 105 ntBASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 CT030170.7-201ENSMUST00000223372 103 ntBASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 Pot1a-209ENSMUST00000166445 1923 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 Tnfsf15-201ENSMUST00000062246 3347 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 Tbc1d24-207ENSMUST00000171189 4592 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Ccdc88cQ6VGS5 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 AC164437.4-204ENSMUST00000227169 4024 ntBASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Stxbp5-202ENSMUST00000125200 3300 ntTSL 5 BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Gm7134-201ENSMUST00000122296 2406 ntBASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Gm22439-201ENSMUST00000104048 132 ntBASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Gm13680-201ENSMUST00000119790 793 ntBASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Gm26505-201ENSMUST00000176208 166 ntBASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Gm37977-201ENSMUST00000193096 721 ntBASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 AC154785.1-201ENSMUST00000223280 572 ntBASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Zfp638-201ENSMUST00000032088 6199 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Btn2a2-203ENSMUST00000110433 2370 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Cenpl-201ENSMUST00000028035 4883 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Rbm28-201ENSMUST00000007993 4465 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Katnal1-201ENSMUST00000047257 6157 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Sap130-201ENSMUST00000025109 4015 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Mir503-201ENSMUST00000102168 71 ntBASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Gm25396-201ENSMUST00000103981 133 ntBASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Gm20111-201ENSMUST00000184830 319 ntBASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Gm4605-201ENSMUST00000203148 625 ntBASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC8.7□□□□□ -1.02
Ccdc88cQ6VGS5 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms