Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Il1rap-201ENSMUST00000023156 4520 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Scn3b-201ENSMUST00000049941 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Ap1s3-203ENSMUST00000162342 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Gm26815-201ENSMUST00000181200 3366 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Mdga2-212ENSMUST00000222987 1388 ntTSL 5 BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 AC124675.1-201ENSMUST00000226263 1390 ntBASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Nrxn3-201ENSMUST00000057634 4634 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Smok3c-201ENSMUST00000110967 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Siglech-202ENSMUST00000094360 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Serpina3n-201ENSMUST00000021506 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Olfr954-202ENSMUST00000214818 3299 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Trim21-201ENSMUST00000033264 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Gm21026-201ENSMUST00000218628 1345 ntBASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Parva-203ENSMUST00000106643 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 L1td1-202ENSMUST00000154279 2942 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Olfr639-201ENSMUST00000106862 1020 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Gm13521-201ENSMUST00000118922 866 ntBASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 AC163667.2-201ENSMUST00000223769 791 ntBASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 H2-M1-201ENSMUST00000041662 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Sp1-202ENSMUST00000163709 3134 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Dpf3-207ENSMUST00000178756 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Zfp936-203ENSMUST00000202535 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Ces2g-201ENSMUST00000043183 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 A630001O12Rik-201ENSMUST00000212914 2182 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 1700006J14Rik-203ENSMUST00000160091 2629 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Sf3b2Q3UJB0 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Sf3b2Q3UJB0 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Sf3b2Q3UJB0 Olfr1312-202ENSMUST00000213582 2891 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Sf3b2Q3UJB0 Elp3-201ENSMUST00000022609 2851 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Sf3b2Q3UJB0 Gm15728-201ENSMUST00000140833 3492 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 AC121860.1-201ENSMUST00000227908 2787 ntBASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Hk1-203ENSMUST00000116238 3851 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Utp14b-202ENSMUST00000151622 3685 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Zfp248-201ENSMUST00000069292 3683 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Prdm6-202ENSMUST00000115398 1474 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Gfm2-209ENSMUST00000161825 4416 ntTSL 2 BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Ccdc187-203ENSMUST00000227200 9528 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Gm11440-201ENSMUST00000121509 527 ntBASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Gm6100-201ENSMUST00000180253 403 ntBASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Mir6908-201ENSMUST00000184056 63 ntBASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Gm27458-201ENSMUST00000185108 121 ntBASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Gm2926-201ENSMUST00000205625 239 ntBASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Gm39121-201ENSMUST00000208847 525 ntBASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Gm34304-201ENSMUST00000218927 1139 ntTSL 5 BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Gm18955-201ENSMUST00000223173 649 ntBASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Gm22748-201ENSMUST00000082493 136 ntBASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Slc2a9-202ENSMUST00000067872 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Rab11b-201ENSMUST00000057373 6109 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Nedd4l-211ENSMUST00000226058 3393 ntBASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 AC117656.3-203ENSMUST00000225007 1809 ntBASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 B3galt5-202ENSMUST00000113800 5282 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Rpgr-204ENSMUST00000115532 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 A230056P14Rik-201ENSMUST00000130189 2177 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Utp6-201ENSMUST00000043152 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Gm17229-202ENSMUST00000166792 1753 ntBASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Mterf4-203ENSMUST00000112944 3097 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 AW822252-205ENSMUST00000192662 1352 ntBASIC10.39□□□□□ -0.75
Sf3b2Q3UJB0 Lhx6-204ENSMUST00000112966 3188 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Gm37978-201ENSMUST00000194736 2915 ntBASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Gm45657-201ENSMUST00000211318 1349 ntBASIC10.38□□□□□ -0.75
Sf3b2Q3UJB0 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms