Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC6.46□□□□□ -1.38
Cdx1P18111 4931429L15Rik-203ENSMUST00000172280 1140 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Cdx1P18111 Gm29436-202ENSMUST00000189054 1172 ntTSL 5 BASIC6.46□□□□□ -1.38
Cdx1P18111 Ing5-203ENSMUST00000190476 918 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx1P18111 Gm3745-201ENSMUST00000193773 421 ntBASIC6.46□□□□□ -1.38
Cdx1P18111 Rpl22l1-206ENSMUST00000194649 525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx1P18111 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Cdx1P18111 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.46□□□□□ -1.38
Cdx1P18111 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC6.46□□□□□ -1.38
Cdx1P18111 Gm45217-201ENSMUST00000206576 1026 ntBASIC6.46□□□□□ -1.38
Cdx1P18111 Gm45866-201ENSMUST00000212425 326 ntTSL 3 BASIC6.46□□□□□ -1.38
Cdx1P18111 AC132384.1-201ENSMUST00000219908 1195 ntBASIC6.46□□□□□ -1.38
Cdx1P18111 AC122774.1-201ENSMUST00000227703 762 ntBASIC6.46□□□□□ -1.38
Cdx1P18111 Hspb3-201ENSMUST00000054650 781 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Cdx1P18111 Mrps36-ps1-201ENSMUST00000061311 306 ntBASIC6.46□□□□□ -1.38
Cdx1P18111 Olfr1333-201ENSMUST00000076019 954 ntAPPRIS P2 BASIC6.46□□□□□ -1.38
Cdx1P18111 Olfr1320-201ENSMUST00000096449 960 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Cdx1P18111 Gm45062-201ENSMUST00000162564 5842 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
Cdx1P18111 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Cdx1P18111 Aldh18a1-207ENSMUST00000176939 3427 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx1P18111 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx1P18111 Gm37398-201ENSMUST00000191914 1466 ntBASIC6.46□□□□□ -1.38
Cdx1P18111 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx1P18111 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Cdx1P18111 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Cdx1P18111 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Gm15614-201ENSMUST00000155976 1537 ntTSL 5 BASIC6.45□□□□□ -1.38
Cdx1P18111 Psg19-203ENSMUST00000182853 1518 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Gm38331-201ENSMUST00000195719 2671 ntBASIC6.45□□□□□ -1.38
Cdx1P18111 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 AC164625.1-201ENSMUST00000214034 3036 ntBASIC6.45□□□□□ -1.38
Cdx1P18111 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Cdx1P18111 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Ighv1-85-201ENSMUST00000103552 351 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Cdx1P18111 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
Cdx1P18111 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Lyg1-202ENSMUST00000114894 798 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 F730035M05Rik-201ENSMUST00000145871 1296 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Gm11464-201ENSMUST00000146963 537 ntTSL 5 BASIC6.45□□□□□ -1.38
Cdx1P18111 Gm17219-201ENSMUST00000168439 593 ntBASIC6.45□□□□□ -1.38
Cdx1P18111 Gm20396-201ENSMUST00000173358 745 ntBASIC6.45□□□□□ -1.38
Cdx1P18111 Gm4252-201ENSMUST00000174823 313 ntBASIC6.45□□□□□ -1.38
Cdx1P18111 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Cdx1P18111 Hcfc1r1-202ENSMUST00000179928 597 ntAPPRIS ALT2 TSL 3 BASIC6.45□□□□□ -1.38
Cdx1P18111 AF067061-202ENSMUST00000181748 881 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Btg1-ps1-202ENSMUST00000184432 825 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 2610105M22Rik-201ENSMUST00000193707 1153 ntBASIC6.45□□□□□ -1.38
Cdx1P18111 Olfr1398-ps1-201ENSMUST00000193866 929 ntBASIC6.45□□□□□ -1.38
Cdx1P18111 Gm8850-201ENSMUST00000195316 588 ntBASIC6.45□□□□□ -1.38
Cdx1P18111 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC6.45□□□□□ -1.38
Cdx1P18111 Gm44306-201ENSMUST00000203058 203 ntBASIC6.45□□□□□ -1.38
Cdx1P18111 Gm45295-201ENSMUST00000210393 1046 ntBASIC6.45□□□□□ -1.38
Cdx1P18111 AC119987.1-201ENSMUST00000212316 848 ntBASIC6.45□□□□□ -1.38
Cdx1P18111 Gm33053-201ENSMUST00000215275 1144 ntTSL 5 BASIC6.45□□□□□ -1.38
Cdx1P18111 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Cdx1P18111 Spats1-201ENSMUST00000024731 1160 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Mylpf-201ENSMUST00000032910 766 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Pglyrp4-201ENSMUST00000047745 1218 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Olfr1120-201ENSMUST00000058737 1018 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Cdx1P18111 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Olfr45-201ENSMUST00000084454 1035 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Cdx1P18111 Gm5614-201ENSMUST00000091097 318 ntBASIC6.45□□□□□ -1.38
Cdx1P18111 Bcl2a1d-201ENSMUST00000098486 863 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Defb23-201ENSMUST00000099206 624 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Gm4149-201ENSMUST00000099371 276 ntBASIC6.45□□□□□ -1.38
Cdx1P18111 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.45□□□□□ -1.38
Cdx1P18111 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Gm10286-201ENSMUST00000093603 5077 ntBASIC6.45□□□□□ -1.38
Cdx1P18111 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Cdx1P18111 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
Cdx1P18111 Tbc1d24-208ENSMUST00000201089 4081 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Olfr96-202ENSMUST00000213475 1834 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Cdx1P18111 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
Cdx1P18111 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Cdx1P18111 Gm44104-201ENSMUST00000204736 3777 ntBASIC6.45□□□□□ -1.38
Cdx1P18111 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Gm11487-201ENSMUST00000084480 1323 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdx1P18111 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms