Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm19688-201ENSMUST00000218652 424 ntBASIC6.41□□□□□ -1.38
Hmgb3O54879 C230072F16Rik-201ENSMUST00000219184 1253 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb3O54879 Gm34278-201ENSMUST00000220534 622 ntTSL 5 BASIC6.41□□□□□ -1.38
Hmgb3O54879 AC140375.1-201ENSMUST00000225421 694 ntBASIC6.41□□□□□ -1.38
Hmgb3O54879 Arhgef33-210ENSMUST00000225548 456 ntBASIC6.41□□□□□ -1.38
Hmgb3O54879 AC165281.1-201ENSMUST00000225713 1011 ntBASIC6.41□□□□□ -1.38
Hmgb3O54879 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Hmgb3O54879 Olfr1388-201ENSMUST00000055584 936 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Hmgb3O54879 Tcl1b1-201ENSMUST00000085043 1040 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb3O54879 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb3O54879 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb3O54879 AC132384.4-201ENSMUST00000220343 1397 ntBASIC6.41□□□□□ -1.38
Hmgb3O54879 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Hmgb3O54879 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
Hmgb3O54879 Gm33543-202ENSMUST00000210336 1428 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Hmgb3O54879 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb3O54879 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb3O54879 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb3O54879 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Hmgb3O54879 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Hmgb3O54879 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Hmgb3O54879 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hmgb3O54879 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hmgb3O54879 Cyp2e1-202ENSMUST00000209253 1582 ntTSL 5 BASIC6.4□□□□□ -1.38
Hmgb3O54879 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hmgb3O54879 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Hmgb3O54879 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hmgb3O54879 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC6.4□□□□□ -1.38
Hmgb3O54879 2700046A07Rik-202ENSMUST00000067450 2101 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Hmgb3O54879 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Hmgb3O54879 Vmn2r30-201ENSMUST00000072475 3616 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Hmgb3O54879 Gm2098-201ENSMUST00000189146 1763 ntBASIC6.4□□□□□ -1.38
Hmgb3O54879 Gm44117-201ENSMUST00000204442 1758 ntBASIC6.4□□□□□ -1.38
Hmgb3O54879 n-R5s1-201ENSMUST00000101925 119 ntBASIC6.4□□□□□ -1.38
Hmgb3O54879 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Hmgb3O54879 Calhm1-201ENSMUST00000111813 1047 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Hmgb3O54879 Gm13047-201ENSMUST00000117116 815 ntBASIC6.4□□□□□ -1.38
Hmgb3O54879 Gm15572-201ENSMUST00000119248 593 ntBASIC6.4□□□□□ -1.38
Hmgb3O54879 Romo1-204ENSMUST00000119950 379 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Hmgb3O54879 Gm11605-201ENSMUST00000120413 646 ntBASIC6.4□□□□□ -1.38
Hmgb3O54879 Gm13360-201ENSMUST00000121607 799 ntBASIC6.4□□□□□ -1.38
Hmgb3O54879 Gm11520-201ENSMUST00000122837 630 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Hmgb3O54879 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Hmgb3O54879 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Hmgb3O54879 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC6.4□□□□□ -1.38
Hmgb3O54879 Spc25-209ENSMUST00000167875 1194 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hmgb3O54879 Gm17158-201ENSMUST00000168150 493 ntBASIC6.4□□□□□ -1.38
Hmgb3O54879 Ear6-202ENSMUST00000169070 893 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Hmgb3O54879 Gm6004-201ENSMUST00000173237 1116 ntBASIC6.4□□□□□ -1.38
Hmgb3O54879 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC6.4□□□□□ -1.38
Hmgb3O54879 1700030O20Rik-201ENSMUST00000185546 594 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Hmgb3O54879 Gm29145-201ENSMUST00000189914 456 ntBASIC6.4□□□□□ -1.38
Hmgb3O54879 Gm3745-201ENSMUST00000193773 421 ntBASIC6.4□□□□□ -1.38
Hmgb3O54879 4930474B08Rik-201ENSMUST00000194161 837 ntBASIC6.4□□□□□ -1.38
Hmgb3O54879 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC6.4□□□□□ -1.38
Hmgb3O54879 Gm8479-202ENSMUST00000204366 1070 ntBASIC6.4□□□□□ -1.38
Hmgb3O54879 Gm43934-201ENSMUST00000205095 388 ntBASIC6.4□□□□□ -1.38
Hmgb3O54879 1700104L18Rik-201ENSMUST00000220132 598 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Hmgb3O54879 AC134917.3-201ENSMUST00000222057 1283 ntBASIC6.4□□□□□ -1.38
Hmgb3O54879 CT025538.1-201ENSMUST00000223638 369 ntBASIC6.4□□□□□ -1.38
Hmgb3O54879 AC153153.1-201ENSMUST00000225803 793 ntBASIC6.4□□□□□ -1.38
Hmgb3O54879 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hmgb3O54879 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Hmgb3O54879 D3Ertd751e-208ENSMUST00000192193 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hmgb3O54879 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Hmgb3O54879 Btbd16-204ENSMUST00000208593 1849 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Hmgb3O54879 Aldh18a1-207ENSMUST00000176939 3427 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Hmgb3O54879 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Hmgb3O54879 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Hmgb3O54879 Gm34297-201ENSMUST00000218569 1980 ntTSL 5 BASIC6.4□□□□□ -1.39
Hmgb3O54879 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Hmgb3O54879 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Hmgb3O54879 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Hmgb3O54879 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Hmgb3O54879 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Hmgb3O54879 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Hmgb3O54879 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC6.4□□□□□ -1.39
Hmgb3O54879 Gm44014-201ENSMUST00000205150 1509 ntBASIC6.4□□□□□ -1.39
Hmgb3O54879 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
Hmgb3O54879 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Hmgb3O54879 Gm44898-201ENSMUST00000205934 2223 ntBASIC6.4□□□□□ -1.39
Hmgb3O54879 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Hmgb3O54879 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Hmgb3O54879 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 AC158686.1-201ENSMUST00000218068 2332 ntBASIC6.39□□□□□ -1.39
Hmgb3O54879 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.39□□□□□ -1.39
Hmgb3O54879 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Tnni2-201ENSMUST00000105971 732 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Hmgb3O54879 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC6.39□□□□□ -1.39
Hmgb3O54879 Gm5400-201ENSMUST00000118494 943 ntBASIC6.39□□□□□ -1.39
Hmgb3O54879 Selenot-ps-201ENSMUST00000119098 593 ntBASIC6.39□□□□□ -1.39
Hmgb3O54879 Olfr621-ps1-201ENSMUST00000119741 938 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms