Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 AC101831.1-201ENSMUST00000228245 691 ntBASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Tmem161b-206ENSMUST00000225069 2414 ntBASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 CT025642.2-201ENSMUST00000225009 1649 ntBASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Olfr169-202ENSMUST00000215040 2316 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Calr4-203ENSMUST00000106629 1583 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Gm7682-202ENSMUST00000202916 1582 ntAPPRIS P5 TSL 5 BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 AC112265.1-201ENSMUST00000213522 1501 ntTSL 5 BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Trav12-1-201ENSMUST00000103650 344 ntAPPRIS ALT2 BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Gm11259-201ENSMUST00000120554 715 ntBASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Gm5883-201ENSMUST00000120735 495 ntBASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Gm16159-201ENSMUST00000126122 947 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 A630023P12Rik-201ENSMUST00000129007 1221 ntTSL 2 BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 1700092C02Rik-201ENSMUST00000134397 359 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Gm7707-201ENSMUST00000165950 1156 ntBASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Csnk2b-203ENSMUST00000173114 917 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Gm38247-201ENSMUST00000194675 433 ntBASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Gm4962-201ENSMUST00000199640 2977 ntBASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Gm45674-201ENSMUST00000210043 450 ntBASIC9.36□□□□□ -0.91
Nup88Q8CEC0 AC162176.1-201ENSMUST00000216490 618 ntBASIC9.36□□□□□ -0.91
Nup88Q8CEC0 AC153961.1-201ENSMUST00000217760 385 ntBASIC9.36□□□□□ -0.91
Nup88Q8CEC0 AC102689.1-201ENSMUST00000220511 1090 ntBASIC9.36□□□□□ -0.91
Nup88Q8CEC0 AC154738.3-201ENSMUST00000227953 409 ntBASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Gm44950-201ENSMUST00000206403 2296 ntBASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Gm44141-201ENSMUST00000204231 1583 ntBASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Gm43792-201ENSMUST00000202492 2210 ntBASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Gm43519-201ENSMUST00000197239 1872 ntBASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Olfr380-203ENSMUST00000127789 1536 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nup88Q8CEC0 Zfat-202ENSMUST00000160248 3866 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Ipcef1-201ENSMUST00000078070 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Gm28813-201ENSMUST00000186293 1497 ntTSL 5 BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Gm29324-202ENSMUST00000188242 1497 ntTSL 5 BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Gm20745-201ENSMUST00000216827 3796 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Dtwd1-201ENSMUST00000110437 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Gm12142-201ENSMUST00000117114 485 ntBASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Gm15578-201ENSMUST00000117320 475 ntBASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Gm13750-201ENSMUST00000117621 465 ntBASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Gm22202-201ENSMUST00000158608 311 ntBASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Gm3252-202ENSMUST00000178748 450 ntTSL 5 BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Gm38047-201ENSMUST00000193690 1133 ntBASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Gm19148-201ENSMUST00000197045 429 ntBASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Gm17977-201ENSMUST00000198743 574 ntBASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Olfr209-204ENSMUST00000213779 564 ntTSL 5 BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 AC171241.2-201ENSMUST00000228744 892 ntBASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Timm8b-201ENSMUST00000044051 518 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Pclaf-201ENSMUST00000045802 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Gm232-201ENSMUST00000216549 2559 ntBASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nup88Q8CEC0 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms