Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Usp47Q8BY87 Gm5181-201ENSMUST00000183140 971 ntBASIC11.12□□□□□ -0.63
Usp47Q8BY87 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Usp47Q8BY87 Gm38305-201ENSMUST00000194825 223 ntBASIC11.12□□□□□ -0.63
Usp47Q8BY87 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Usp47Q8BY87 Gm22711-202ENSMUST00000197029 135 ntBASIC11.12□□□□□ -0.63
Usp47Q8BY87 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC11.12□□□□□ -0.63
Usp47Q8BY87 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC11.12□□□□□ -0.63
Usp47Q8BY87 AC132587.1-201ENSMUST00000220562 166 ntBASIC11.12□□□□□ -0.63
Usp47Q8BY87 Gm46317-201ENSMUST00000221103 393 ntBASIC11.12□□□□□ -0.63
Usp47Q8BY87 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Usp47Q8BY87 AC146596.1-201ENSMUST00000223507 223 ntBASIC11.12□□□□□ -0.63
Usp47Q8BY87 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Usp47Q8BY87 Gm10123-201ENSMUST00000075723 490 ntBASIC11.12□□□□□ -0.63
Usp47Q8BY87 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Usp47Q8BY87 Mir135b-201ENSMUST00000083501 97 ntBASIC11.12□□□□□ -0.63
Usp47Q8BY87 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Usp47Q8BY87 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Usp47Q8BY87 Gm18908-201ENSMUST00000207125 1483 ntBASIC11.12□□□□□ -0.63
Usp47Q8BY87 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Usp47Q8BY87 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Usp47Q8BY87 Slco5a1-207ENSMUST00000188454 8463 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Usp47Q8BY87 Aqp9-203ENSMUST00000113570 1712 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Usp47Q8BY87 Eif2ak4-206ENSMUST00000110874 5298 ntTSL 5 BASIC11.12□□□□□ -0.63
Usp47Q8BY87 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Usp47Q8BY87 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Usp47Q8BY87 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Usp47Q8BY87 Casq2-201ENSMUST00000029454 2556 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Usp47Q8BY87 Nrip1-202ENSMUST00000121927 7868 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Usp47Q8BY87 Etl4-205ENSMUST00000114607 3055 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Usp47Q8BY87 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Usp47Q8BY87 Rfxank-201ENSMUST00000075724 3609 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Usp47Q8BY87 Ints2-201ENSMUST00000018212 5906 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Zc2hc1c-201ENSMUST00000059341 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Gm43515-201ENSMUST00000197930 2141 ntBASIC11.11□□□□□ -0.63
Usp47Q8BY87 Gm36120-201ENSMUST00000214393 1734 ntTSL 5 BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Mir669e-201ENSMUST00000117003 119 ntBASIC11.11□□□□□ -0.63
Usp47Q8BY87 Gm14450-201ENSMUST00000119984 240 ntBASIC11.11□□□□□ -0.63
Usp47Q8BY87 Gm12642-201ENSMUST00000121098 876 ntBASIC11.11□□□□□ -0.63
Usp47Q8BY87 Gm13828-201ENSMUST00000122278 363 ntBASIC11.11□□□□□ -0.63
Usp47Q8BY87 n-R5s47-201ENSMUST00000122516 119 ntBASIC11.11□□□□□ -0.63
Usp47Q8BY87 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Olfr721-ps1-201ENSMUST00000165291 975 ntBASIC11.11□□□□□ -0.63
Usp47Q8BY87 Mir6340-201ENSMUST00000183857 119 ntBASIC11.11□□□□□ -0.63
Usp47Q8BY87 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Gm37585-201ENSMUST00000195440 280 ntBASIC11.11□□□□□ -0.63
Usp47Q8BY87 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Usp47Q8BY87 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC11.11□□□□□ -0.63
Usp47Q8BY87 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Gm19011-201ENSMUST00000221777 808 ntBASIC11.11□□□□□ -0.63
Usp47Q8BY87 Snora9-201ENSMUST00000082579 133 ntBASIC11.11□□□□□ -0.63
Usp47Q8BY87 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Gm20045-201ENSMUST00000192658 5577 ntBASIC11.11□□□□□ -0.63
Usp47Q8BY87 Hivep2-201ENSMUST00000015645 9763 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Usp47Q8BY87 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Rtl3-201ENSMUST00000062010 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Usp47Q8BY87 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Usp47Q8BY87 Abr-204ENSMUST00000108407 4811 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Usp47Q8BY87 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Usp47Q8BY87 Gm36401-201ENSMUST00000194255 2028 ntBASIC11.1□□□□□ -0.63
Usp47Q8BY87 Clec1a-201ENSMUST00000037481 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Usp47Q8BY87 Gm43800-201ENSMUST00000201868 2731 ntBASIC11.1□□□□□ -0.63
Usp47Q8BY87 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Usp47Q8BY87 Wls-201ENSMUST00000068952 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Usp47Q8BY87 Fto-201ENSMUST00000069718 3564 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Usp47Q8BY87 Fam168a-202ENSMUST00000107042 6388 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Usp47Q8BY87 Thrb-202ENSMUST00000022304 6200 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Usp47Q8BY87 Arpp21-201ENSMUST00000035085 3254 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Usp47Q8BY87 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Usp47Q8BY87 AC124675.1-201ENSMUST00000226263 1390 ntBASIC11.1□□□□□ -0.63
Usp47Q8BY87 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Usp47Q8BY87 Pkd1l3-201ENSMUST00000057344 6456 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Usp47Q8BY87 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC11.1□□□□□ -0.63
Usp47Q8BY87 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Usp47Q8BY87 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Usp47Q8BY87 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC11.1□□□□□ -0.63
Usp47Q8BY87 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC11.1□□□□□ -0.63
Usp47Q8BY87 Gm20274-201ENSMUST00000206967 584 ntBASIC11.1□□□□□ -0.63
Usp47Q8BY87 Gm32842-201ENSMUST00000212653 738 ntBASIC11.1□□□□□ -0.63
Usp47Q8BY87 AC154806.1-202ENSMUST00000227949 885 ntBASIC11.1□□□□□ -0.63
Usp47Q8BY87 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Usp47Q8BY87 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC11.1□□□□□ -0.63
Usp47Q8BY87 Olfr890-201ENSMUST00000079804 945 ntBASIC11.1□□□□□ -0.63
Usp47Q8BY87 Gm25852-201ENSMUST00000082790 130 ntBASIC11.1□□□□□ -0.63
Usp47Q8BY87 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms