Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Stk11ip-201ENSMUST00000027414 4458 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Usp54Q8BL06 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Dlk1-208ENSMUST00000173539 3914 ntTSL 5 BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Elp3-203ENSMUST00000225355 2771 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Hfe-202ENSMUST00000091706 3572 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Gsap-201ENSMUST00000036031 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Phactr1-205ENSMUST00000128646 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Gm24682-201ENSMUST00000158764 137 ntBASIC11.08□□□□□ -0.64
Usp54Q8BL06 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Gm7651-201ENSMUST00000173398 901 ntBASIC11.08□□□□□ -0.64
Usp54Q8BL06 Gm26179-201ENSMUST00000177723 132 ntBASIC11.08□□□□□ -0.64
Usp54Q8BL06 Gm27218-201ENSMUST00000183745 392 ntBASIC11.08□□□□□ -0.64
Usp54Q8BL06 Gm8539-201ENSMUST00000199822 501 ntBASIC11.08□□□□□ -0.64
Usp54Q8BL06 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Phc1-201ENSMUST00000079560 3839 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Ttll1-203ENSMUST00000109480 1876 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Parpbp-201ENSMUST00000048518 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Usp54Q8BL06 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Usp54Q8BL06 5330417C22Rik-201ENSMUST00000048012 3321 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Slc13a4-201ENSMUST00000031868 3427 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Usp54Q8BL06 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Ptges-202ENSMUST00000102852 3647 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Ctbp2-214ENSMUST00000169570 3604 ntTSL 5 BASIC11.08□□□□□ -0.64
Usp54Q8BL06 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Gm26321-201ENSMUST00000157740 242 ntBASIC11.07□□□□□ -0.64
Usp54Q8BL06 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Usp54Q8BL06 U2af1l4-204ENSMUST00000163464 651 ntTSL 5 BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Gm7244-201ENSMUST00000164658 455 ntBASIC11.07□□□□□ -0.64
Usp54Q8BL06 Gm20396-201ENSMUST00000173358 745 ntBASIC11.07□□□□□ -0.64
Usp54Q8BL06 Gm3611-201ENSMUST00000173687 877 ntBASIC11.07□□□□□ -0.64
Usp54Q8BL06 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Gm17833-201ENSMUST00000197629 1065 ntBASIC11.07□□□□□ -0.64
Usp54Q8BL06 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC11.07□□□□□ -0.64
Usp54Q8BL06 Gm45506-201ENSMUST00000211620 280 ntBASIC11.07□□□□□ -0.64
Usp54Q8BL06 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Ralgps1-204ENSMUST00000113165 6192 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Gm44895-201ENSMUST00000206670 1538 ntBASIC11.07□□□□□ -0.64
Usp54Q8BL06 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Tacr1-202ENSMUST00000203775 4933 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Pde6a-201ENSMUST00000025468 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Brca2-210ENSMUST00000202313 10517 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Myt1l-205ENSMUST00000218583 4522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Gpr152-201ENSMUST00000096338 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Atxn7l1-213ENSMUST00000154742 3548 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Usp54Q8BL06 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Gm25344-201ENSMUST00000104503 132 ntBASIC11.07□□□□□ -0.64
Usp54Q8BL06 Gm13243-201ENSMUST00000117481 565 ntBASIC11.07□□□□□ -0.64
Usp54Q8BL06 Gm4773-201ENSMUST00000120392 702 ntBASIC11.07□□□□□ -0.64
Usp54Q8BL06 Gm16357-201ENSMUST00000144091 474 ntBASIC11.07□□□□□ -0.64
Usp54Q8BL06 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Gm7341-201ENSMUST00000192183 926 ntBASIC11.07□□□□□ -0.64
Usp54Q8BL06 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Gm43849-201ENSMUST00000201086 215 ntBASIC11.07□□□□□ -0.64
Usp54Q8BL06 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Il1rl1-203ENSMUST00000173514 2661 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Actr10-201ENSMUST00000021479 4022 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Usp54Q8BL06 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Usp54Q8BL06 Olfr443-ps1-202ENSMUST00000204422 1617 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Usp54Q8BL06 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Usp54Q8BL06 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Usp54Q8BL06 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Usp54Q8BL06 Gm10286-201ENSMUST00000093603 5077 ntBASIC11.06□□□□□ -0.64
Usp54Q8BL06 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Usp54Q8BL06 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Usp54Q8BL06 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Usp54Q8BL06 Ctns-202ENSMUST00000108476 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Usp54Q8BL06 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Usp54Q8BL06 Gm37649-201ENSMUST00000192079 2232 ntBASIC11.06□□□□□ -0.64
Usp54Q8BL06 Mertk-201ENSMUST00000014505 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Usp54Q8BL06 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms