Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm3839-201ENSMUST00000181173 1712 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm42603-201ENSMUST00000199893 2146 ntBASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Them7-201ENSMUST00000068813 1556 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Nos1-202ENSMUST00000102557 4591 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 5430427N15Rik-201ENSMUST00000200007 2393 ntBASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm36670-202ENSMUST00000210400 1405 ntTSL 5 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Zfp84-201ENSMUST00000032802 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Trak2-205ENSMUST00000174120 2636 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Ighv1-59-201ENSMUST00000103530 348 ntAPPRIS ALT2 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm13160-201ENSMUST00000118441 627 ntBASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm7645-201ENSMUST00000119008 788 ntBASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm11203-201ENSMUST00000122169 741 ntBASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm15742-201ENSMUST00000123905 659 ntTSL 3 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 D630024D03Rik-203ENSMUST00000134944 715 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm24063-201ENSMUST00000157491 105 ntBASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm22949-201ENSMUST00000158562 105 ntBASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm18828-201ENSMUST00000180475 857 ntBASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm6410-201ENSMUST00000181337 1105 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm21542-201ENSMUST00000182307 993 ntBASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 4933400F21Rik-201ENSMUST00000186098 1007 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm29175-201ENSMUST00000189500 402 ntBASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 4930474B08Rik-201ENSMUST00000194161 837 ntBASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm37285-201ENSMUST00000194465 1139 ntBASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm37450-201ENSMUST00000195218 170 ntBASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 AC153937.3-201ENSMUST00000217814 706 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 BC042761-201ENSMUST00000218344 938 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 AC116465.1-201ENSMUST00000220324 235 ntBASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 AC102689.1-201ENSMUST00000220511 1090 ntBASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm32089-201ENSMUST00000221222 1193 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm33115-202ENSMUST00000223487 703 ntTSL 5 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 AC167977.2-201ENSMUST00000225676 682 ntBASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 AC137117.3-201ENSMUST00000226265 485 ntBASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Olfr1402-201ENSMUST00000060912 963 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Fabp3-ps1-201ENSMUST00000070435 402 ntBASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm5560-201ENSMUST00000086918 892 ntBASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Vsnl1-202ENSMUST00000220506 1699 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Selenop-203ENSMUST00000159216 2085 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm7457-201ENSMUST00000100821 2459 ntTSL 2 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Ttc29-201ENSMUST00000049395 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm12436-201ENSMUST00000131099 2959 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Ncam1-202ENSMUST00000166811 3088 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Selenop-201ENSMUST00000082424 2013 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Cnpy1-203ENSMUST00000120068 2284 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Sele-201ENSMUST00000027874 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Olfr117-202ENSMUST00000213638 3183 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Utrn-204ENSMUST00000217994 3161 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm44873-201ENSMUST00000208490 3428 ntBASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Ccser2-207ENSMUST00000182797 1482 ntTSL 5 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Acsl6-206ENSMUST00000101211 3106 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 AC158238.1-201ENSMUST00000216899 1965 ntBASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Lyn-202ENSMUST00000103010 3387 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Pcyt1a-201ENSMUST00000079791 4789 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Gm26703-202ENSMUST00000181506 2982 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 4930433I11Rik-202ENSMUST00000206529 2963 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Gm12430-201ENSMUST00000121539 1322 ntBASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Pkib-201ENSMUST00000066028 1552 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Gm37821-201ENSMUST00000195476 1843 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Gm30382-202ENSMUST00000199007 1801 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Gm15834-201ENSMUST00000129740 2097 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Nup107-202ENSMUST00000167943 3098 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Egf-202ENSMUST00000197079 3346 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Adgrl2-214ENSMUST00000199238 4670 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Ephx1-202ENSMUST00000111068 1699 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Ftsj1-203ENSMUST00000115595 1656 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Lrit2-201ENSMUST00000057176 2790 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Ano4-208ENSMUST00000182613 3880 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 C2cd5-202ENSMUST00000111758 4062 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Lypd8-202ENSMUST00000108826 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Gm14465-201ENSMUST00000120603 567 ntBASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Gm11739-201ENSMUST00000125269 723 ntTSL 3 BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Gm13012-202ENSMUST00000155349 849 ntTSL 2 BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Gm16103-201ENSMUST00000163003 1279 ntBASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Gm18416-201ENSMUST00000175635 1003 ntBASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Pcdh19Q80TF3 Gm28356-202ENSMUST00000187566 858 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 122.4 ms